RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 IDUAP35475 653 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 CTSOP43234 321 aaPredicted RBP14.11□□□□□ -0.15
HDAC9-208ENST00000417496 TUBA3CQ13748 450 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 ATP13A5Q4VNC0 1218 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 ZNF691Q5VV52 312 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 MACC1Q6ZN28 852 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 DNAJB7Q7Z6W7 309 aaPredicted RBP14.11□□□□□ -0.15
HDAC9-208ENST00000417496 VTCN1Q7Z7D3 282 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 CALHM3Q86XJ0 350 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 ZDHHC21Q8IVQ6 265 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 ZNF461Q8TAF7 563 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 ERLEC1Q96DZ1 483 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 DPH2Q9BQC3 489 aaPredicted RBP14.11□□□□□ -0.15
HDAC9-208ENST00000417496 ELAC1Q9H777 363 aaKnown RBP14.11□□□□□ -0.15
HDAC9-208ENST00000417496 USE1Q9NZ43 259 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 DNMT3BQ9UBC3 853 aaKnown RBP14.11□□□□□ -0.15
HDAC9-208ENST00000417496 CD84Q9UIB8 345 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 COQ6Q9Y2Z9 468 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 YIPF1Q9Y548 306 aa14.11□□□□□ -0.15
HDAC9-208ENST00000417496 TRBV5-4A0A0C4DH59 114 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 BCKDKO14874 412 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 GREM1O60565 184 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 ZNF821O75541 412 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-208ENST00000417496 ANXA5P08758 320 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 AP1S1P61966 158 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 SREBF2Q12772 1141 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 DGCR6Q14129 220 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CTF1Q16619 201 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CPZQ66K79 652 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 ATG9BQ674R7 924 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 NEK5Q6P3R8 708 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-208ENST00000417496 IGFN1Q86VF2 1251 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 PLPP6Q8IY26 295 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CDC26Q8NHZ8 85 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 RDH12Q96NR8 316 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 HTATIP2Q9BUP3 242 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 ATG10Q9H0Y0 220 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 PCDH10Q9P2E7 1040 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 SLC22A14Q9Y267 594 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 SNX5Q9Y5X3 404 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CFAP99D6REC4 459 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 RFXANKO14593 260 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 WDR47O94967 919 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 MYCP01106 439 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-208ENST00000417496 KRT6AP02538 564 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 KRT6BP04259 564 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 COL6A1P12109 1028 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 SPAM1P38567 509 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 KRT6CP48668 564 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CLDN8P56748 225 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 PHEXP78562 749 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CYP2A13Q16696 494 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 PTCHD3Q3KNS1 767 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 LRRC66Q68CR7 880 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 ZCCHC8Q6NZY4 707 aaKnown RBP14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CRTC1Q6UUV9 634 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 UBE2R2Q712K3 238 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CRIPAKQ8N1N5 446 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 OR7A2PQ8NGA2 310 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 MUL1Q969V5 352 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 BBS2Q9BXC9 721 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 KCNH6Q9H252 994 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 SLC32A1Q9H598 525 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 SELENONQ9NZV5 590 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 CPQQ9Y646 472 aa14.1□□□□□ -0.15
HDAC9-208ENST00000417496 FUOMA2VDF0 154 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 ERN1O75460 977 aaKnown RBP14.09□□□□□ -0.15
HDAC9-208ENST00000417496 IGFBP5P24593 272 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 CD70P32970 193 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 DAPP51397 102 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 RAD23AP54725 363 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 BOP1Q14137 746 aaKnown RBP14.09□□□□□ -0.15
HDAC9-208ENST00000417496 GRAMD4Q6IC98 578 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 CCDC81Q6ZN84 652 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 TMEM132CQ8N3T6 1108 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 TMCO5AQ8N6Q1 288 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 DCAF4L2Q8NA75 395 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 MCOLN3Q8TDD5 553 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 OVCA2Q8WZ82 227 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 ASIC4Q96FT7 647 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 ZNF334Q9HCZ1 680 aaPredicted RBP14.09□□□□□ -0.15
HDAC9-208ENST00000417496 A0A096LPI6 279 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 FAM220BPB1ANY3 271 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 PRRG1O14668 218 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 NDUFS2O75306 463 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 ANGPTL1O95841 491 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 CD6P30203 668 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 CCL23P55773 120 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 LRIF1Q5T3J3 769 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 RETSATQ6NUM9 610 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 SERPINA13PQ6UXR4 307 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 B3GNT8Q7Z7M8 397 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 BEND7Q8N7W2 519 aaPredicted RBP14.09□□□□□ -0.15
HDAC9-208ENST00000417496 HJURPQ8NCD3 748 aaPredicted RBP14.09□□□□□ -0.15
HDAC9-208ENST00000417496 FAR1Q8WVX9 515 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 C2orf49Q9BVC5 232 aaPredicted RBP14.09□□□□□ -0.15
HDAC9-208ENST00000417496 ALOXE3Q9BYJ1 711 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 AASDHPPTQ9NRN7 309 aa14.09□□□□□ -0.15
HDAC9-208ENST00000417496 RASSF1Q9NS23 344 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms