RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CD82P27701 267 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 AP1S2P56377 157 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 PCBP4P57723 403 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 ZKSCAN8Q15776 578 aaPredicted RBP22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 UBAP2Q5T6F2 1119 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 MROH9Q5TGP6 573 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 CCDC91Q7Z6B0 441 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 TAX1BP1Q86VP1 789 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 GSPT2Q8IYD1 628 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 FLVCR1-AS1Q8TAF5 88 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 UHMK1Q8TAS1 419 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 TCTN2Q96GX1 697 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 OR6C1Q96RD1 312 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 CCDC77Q9BR77 488 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 TXLNGYQ9BZA5 131 aa22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 NOVA2Q9UNW9 492 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-205ENST00000417137 EXOC1LA0A1B0GW35 172 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 KRT87PA6NCN2 255 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 C9orf172C9J069 976 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 POC1B-GALNT4F8VUJ3 575 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 PHGDHO43175 533 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 PRAMEF10O60809 474 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 CCDC166P0CW27 439 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 MYBL2P10244 700 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 ST6GAL1P15907 406 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 PEBP1P30086 187 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 RPA3P35244 121 aaPredicted RBP22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 SH3BP2P78314 561 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 LGSNQ5TDP6 509 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 PROSER1Q86XN7 944 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 CNPY4Q8N129 248 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 LMNTD1Q8N9Z9 388 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 OR8K5Q8NH50 307 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 SNIP1Q8TAD8 396 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 ZNF480Q8WV37 535 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 DLG3Q92796 817 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 PAFAH2Q99487 392 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 DERL2Q9GZP9 239 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 FANCEQ9HB96 536 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 CTNNAL1Q9UBT7 734 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 TLK1Q9UKI8 766 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 RARRES3Q9UL19 164 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 B3GALT1Q9Y5Z6 326 aa22.28■■□□□ 1.16
SMARCB1-205ENST00000417137 PRICKLE3O43900 615 aaPredicted RBP22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 KRT38O76015 456 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 FOLR1P15328 257 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 CNTFP26441 200 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ATP6V0D1P61421 351 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 TUBB3Q13509 450 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 TSTA3Q13630 321 aaPredicted RBP22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 FASTKQ14296 549 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 SLC29A2Q14542 456 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 NAA25Q14CX7 972 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ADAMTSL2Q86TH1 951 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 TRIM73Q86UV7 250 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 PPP1R3BQ86XI6 285 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 C19orf47Q8N9M1 422 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ZNF248Q8NDW4 579 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ANKRD49Q8WVL7 239 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ATL1Q8WXF7 558 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ZUFSPQ96AP4 578 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 CTRCQ99895 268 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 CHRNA10Q9GZZ6 450 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 FGF21Q9NSA1 209 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ARL15Q9NXU5 204 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ZNF180Q9UJW8 692 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 ACSL6Q9UKU0 697 aa22.27■■□□□ 1.16
SMARCB1-205ENST00000417137 E7ENX8 843 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 RRP8O43159 456 aaKnown RBP22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 CCNDBP1O95273 360 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 WISP3O95389 354 aaPredicted RBP22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 EBLN1P0CF75 366 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 FGF5P12034 268 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 PVRP15151 417 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 CMPK1P30085 196 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 SLC26A3P40879 764 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 TAP2Q03519 686 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 KCNAB1Q14722 419 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 PHKG1Q16816 387 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 WDR93Q6P2C0 686 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 TBC1D1Q86TI0 1168 aaPredicted RBP22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 N4BP2L2Q92802 583 aaPredicted RBP22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 FCRL4Q96PJ5 515 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 KLHL25Q9H0H3 589 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 STOX2Q9P2F5 926 aaPredicted RBP22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 ZMIZ1Q9ULJ6 1067 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 ACOT9Q9Y305 439 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 FAM208BQ5VWN6 2430 aa22.26■■□□□ 1.15
SMARCB1-205ENST00000417137 FRYQ5TBA9 3013 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 A0A087X1B8 175 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 A0A1W2PPV9 198 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 TARM1B6A8C7 271 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 CDC7O00311 574 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 MSL3P1P0C860 447 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 CCND1P24385 295 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 IMPA1P29218 277 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 TYK2P29597 1187 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 SERPINB8P50452 374 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 BMPR2Q13873 1038 aa22.25■■□□□ 1.15
SMARCB1-205ENST00000417137 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms