RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 ZNF821O75541 412 aaPredicted RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 TIPRLO75663 272 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 KLF8O95600 359 aaPredicted RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 EBLN1P0CF75 366 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ARL1P40616 181 aaPredicted RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 EIF2DP41214 584 aaKnown RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 NR1H2P55055 460 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 MYLK3Q32MK0 819 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TIGD2Q4W5G0 525 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 PAGE3Q5JUK9 113 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TMTC4Q5T4D3 741 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 BORAQ6PGQ7 559 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 CYP20A1Q6UW02 462 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SCIMPQ6UWF3 145 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TMEM92Q6UXU6 159 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 FKBP9P1Q75LS8 142 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 AMIGO2Q86SJ2 522 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SPPL2CQ8IUH8 684 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ETFBKMTQ8IXQ9 262 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ALDH16A1Q8IZ83 802 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 IL17RCQ8NAC3 791 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 OR8J3Q8NGG0 315 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 LKAAEAR1Q8TD35 194 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 NETO1Q8TDF5 533 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 POP5Q969H6 163 aaKnown RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 VPS33AQ96AX1 596 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 RHBDF1Q96CC6 855 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 OTUB2Q96DC9 234 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 DGCR14Q96DF8 476 aaKnown RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 SCRN2Q96FV2 425 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 LOXL4Q96JB6 756 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ZC3H10Q96K80 434 aaKnown RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 TEX37Q96LM6 180 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 EGFL8Q99944 293 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 BOCQ9BWV1 1114 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 RXFP3Q9NSD7 469 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 PCDHB3Q9Y5E6 796 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 PRSS21Q9Y6M0 314 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SPAG17Q6Q759 2223 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 PIKFYVEQ9Y2I7 2098 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 IGLV3-16A0A075B6K0 115 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TCRBV5S2A0A599 114 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SLC30A4O14863 429 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ANKRD28O15084 1053 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 HOXC11O43248 304 aaPredicted RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 TULP3O75386 442 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 KATNA1O75449 491 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TRIM16O95361 564 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SRCP12931 536 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 VARSP26640 1264 aaKnown RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 IL12AP29459 219 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 GSTT1P30711 240 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 CD70P32970 193 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 KIR2DL1P43626 348 aaPredicted RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 HSPA7P48741 367 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 HTR6P50406 440 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 MRPS21P82921 87 aaKnown RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 PWP1Q13610 501 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ATP6AP1Q15904 470 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 NRF1Q16656 503 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 AP5B1Q2VPB7 878 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 NANOGP8Q6NSW7 305 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 C22orf39Q6P5X5 142 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 CRTC1Q6UUV9 634 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TRIM46Q7Z4K8 759 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SPRED1Q7Z699 444 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 FAM9CQ8IZT9 166 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TNIP2Q8NFZ5 429 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 OR6K2Q8NGY2 324 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 DNAJB8Q8NHS0 232 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 HM13Q8TCT9 377 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ESAMQ96AP7 390 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 MAGEB10Q96LZ2 347 aaPredicted RBP14.44□□□□□ -0.1
USP4-203ENST00000415188 CIB1Q99828 191 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 TMEM79Q9BSE2 394 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SUV39H2Q9H5I1 410 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 NANOGQ9H9S0 305 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SPHK2Q9NRA0 654 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 ELOVL2Q9NXB9 296 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 SLC25A13Q9UJS0 675 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 AURKCQ9UQB9 309 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 CCL27Q9Y4X3 112 aa14.44□□□□□ -0.1
USP4-203ENST00000415188 A0A0U1RQS6 177 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 ENO4A6NNW6 628 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 C9JVG2 144 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 GPR39O43194 453 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 POP4O95707 220 aaKnown RBP14.43□□□□□ -0.1
USP4-203ENST00000415188 TFAP2AP05549 437 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 ANXA5P08758 320 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 ZNF806P0C7X5 589 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 MPC1LP0DKB6 136 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 HOXB6P17509 224 aaKnown RBP14.43□□□□□ -0.1
USP4-203ENST00000415188 BCKDHBP21953 392 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 POLE2P56282 527 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 TUBA4AP68366 448 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 DYNC1I2Q13409 638 aaKnown RBP14.43□□□□□ -0.1
USP4-203ENST00000415188 CYP51A1Q16850 503 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 LRRC70Q7Z2Q7 622 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 PLPP6Q8IY26 295 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms