RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NKX2-5P52952 324 aaPredicted RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 RPS14P62263 151 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 VAC14Q08AM6 782 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 KCNJ8Q15842 424 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 TTLL9Q3SXZ7 439 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 HECTD3Q5T447 861 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 GPRC6AQ5T6X5 926 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CPZQ66K79 652 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CXorf57Q6NSI4 855 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 MACC1Q6ZN28 852 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 GCNT7Q6ZNI0 430 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ANKS3Q6ZW76 656 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 UTS2BQ765I0 119 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 DET1Q7L5Y6 550 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SLC22A15Q8IZD6 547 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ZBTB2Q8N680 514 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 NETO1Q8TDF5 533 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 LINC01599Q8WXQ3 324 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 UBE2FQ969M7 185 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 TESCQ96BS2 214 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 DUSP21Q9H596 190 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ELAC1Q9H777 363 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 SCN3BQ9NY72 215 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 PNMA8BQ9ULN7 279 aaPredicted RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 PLXNA4Q9HCM2 1894 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SERTM1A2A2V5 107 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 LOC730098B7Z3J9 87 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 STC2O76061 302 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CLDN9O95484 217 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 NADKO95544 446 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 NTRK1P04629 796 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ALOX5P09917 674 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CKBP12277 381 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 BCKDHAP12694 445 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 EPHA2P29317 976 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 S100A3P33764 101 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 GRK3P35626 688 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 PTPN5P54829 565 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 AP1S1P61966 158 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 MVKQ03426 396 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 TWF1Q12792 350 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SLC13A2Q13183 592 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SELENBP1Q13228 472 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 DGCR6Q14129 220 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 GBX1Q14549 363 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 INAQ16352 499 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 DGUOKQ16854 277 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 GPR33Q49SQ1 333 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SYT6Q5T7P8 510 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 ARMC12Q5T9G4 340 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CAPN13Q6MZZ7 669 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 SUSD1Q6UWL2 747 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 RAVER1Q8IY67 606 aaKnown RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 KRTCAP2Q8N6L1 136 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 OR7A2PQ8NGA2 310 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 PIH1D2Q8WWB5 315 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 RORBQ92753 470 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 NCLNQ969V3 563 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ULK4Q96C45 1275 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 EID2BQ96D98 161 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 YIPF6Q96EC8 236 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 MIR1-1HGQ9H1L0 117 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 TNKS2Q9H2K2 1166 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 TM9SF3Q9HD45 589 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CCNB1IP1Q9NPC3 277 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SERHLQ9NQF3 203 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 FBXO8Q9NRD0 319 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 FARSBQ9NSD9 589 aaKnown RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 TRMT13Q9NUP7 481 aaKnown RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 ATAD3AQ9NVI7 634 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 ITGB1BP2Q9UKP3 347 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 TMED5Q9Y3A6 229 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ZNF840PA6NDX5 716 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 GAPDHSO14556 408 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 STK16O75716 305 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 FKBP9O95302 570 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 PGLSO95336 258 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ANGPTL1O95841 491 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 FTH1P02794 183 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 KLKB1P03952 638 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ATF6P18850 670 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ITGALP20701 1170 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ACRV1P26436 265 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 MAPK1P28482 360 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CORO1AP31146 461 aaKnown RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 TUFMP49411 452 aaKnown RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 SGSHP51688 502 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 CSNK2BP67870 215 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 HMGCS1Q01581 520 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ABRQ12979 859 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 NFATC2Q13469 925 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 GGTA1PQ4G0N0 100 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 RSPO2Q6UXX9 243 aaPredicted RBP9.55□□□□□ -0.88
CD44-206ENST00000415148 B3GNT8Q7Z7M8 397 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SERPINA11Q86U17 422 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 SLC22A16Q86VW1 577 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 IFNL1Q8IU54 200 aa9.55□□□□□ -0.88
CD44-206ENST00000415148 ZDHHC21Q8IVQ6 265 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms