RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CHRNA3P32297 505 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SHMT1P34896 483 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PCGF2P35227 344 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ZNF81P51508 661 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 LUMP51884 338 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 NAGLUP54802 743 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TAS2R40P59535 323 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ELP6Q0PNE2 266 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 KLHL26Q53HC5 615 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ALG10Q5BKT4 473 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ALG10BQ5I7T1 473 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TXNDC8Q6A555 127 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 WDR88Q6ZMY6 472 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MACC1Q6ZN28 852 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 UBALD2Q8IYN6 164 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 HDDC3Q8N4P3 179 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ARL14EPQ8N8R7 260 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 LPCAT1Q8NF37 534 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SLC13A3Q8WWT9 602 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SELENOMQ8WWX9 145 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SPSB1Q96BD6 273 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 BICD1Q96G01 975 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 FAM89AQ96GI7 184 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MAP7D2Q96T17 732 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TMEM47Q9BQJ4 181 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 SLC25A23Q9BV35 468 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 NCOR1P1Q9H4R4 102 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ASB6Q9NWX5 421 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PPP4R1LQ9P1A2 415 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 CDH7Q9ULB5 785 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 CHKBQ9Y259 395 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 CARD8Q9Y2G2 431 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 Q9Y3F1 56 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 CLIC4Q9Y696 253 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MYH4Q9Y623 1939 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MYO5AQ9Y4I1 1855 aaKnown RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 ASB14A6NK59 587 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TCP10L2B9ZVM9 353 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 C5orf67F2Z3F1 127 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PGRMC2O15173 223 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MBTPS2O43462 519 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TMCC1O94876 653 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PROS1P07225 676 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ELFN1P0C7U0 828 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ACTN1P12814 892 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 RPS19P39019 145 aaKnown RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 RAB28P51157 221 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ACTR1AP61163 376 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ST8SIA6P61647 398 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 DGCR2P98153 550 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 RBPJQ06330 500 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MEP1AQ16819 746 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 UGP2Q16851 508 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 C2orf76Q3KRA6 126 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TIGD2Q4W5G0 525 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 FIGLAQ6QHK4 219 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 NEK8Q86SG6 692 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MB21D2Q8IYB1 491 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 SMYD1Q8NB12 490 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ATAD1Q8NBU5 361 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ADPRHL1Q8NDY3 354 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 OR2AJ1Q8NGZ0 328 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ACTRT2Q8TDY3 377 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 ZNF707Q96C28 371 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 SPDL1Q96EA4 605 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 C16orf58Q96GQ5 468 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 VCPIP1Q96JH7 1222 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 C16orf45Q96MC5 204 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 TTC25Q96NG3 672 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 BCL7BQ9BQE9 202 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 MLST8Q9BVC4 326 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 HOMER3Q9NSC5 361 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 EHD3Q9NZN3 535 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 PLEKHA6Q9Y2H5 1048 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 TMED3Q9Y3Q3 217 aa2.5□□□□□ -2.01
MCF2-204ENST00000414978 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.5□□□□□ -2.01
MCF2-204ENST00000414978 DPPA5A6NC42 116 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 B4DGG1 531 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 RNASET2O00584 256 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 LRP3O75074 770 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MT-CO3P00414 261 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ICAM1P05362 532 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CAPN1P07384 714 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 VPREB1P12018 145 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CPA3P15088 417 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 IL9P15248 144 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRLRP16471 622 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CASQ1P31415 396 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PRPHP41219 470 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PTH2RP49190 550 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 MTTPP55157 894 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KRT31Q15323 416 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KCNA10Q16322 511 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 USP41Q3LFD5 358 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ZNF528Q3MIS6 628 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 FNDC1Q4ZHG4 1894 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 FBLN7Q53RD9 439 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KRT79Q5XKE5 535 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KLHL10Q6JEL2 608 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PODNL1Q6PEZ8 512 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms