RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 ANO3Q9BYT9 981 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 RNF32Q9H0A6 362 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF700Q9H0M5 742 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 OPN3Q9H1Y3 402 aaPredicted RBP13.56□□□□□ -0.24
LINC00887-202ENST00000414120 CLEC4MQ9H2X3 399 aaPredicted RBP13.56□□□□□ -0.24
LINC00887-202ENST00000414120 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 HEXA-AS1Q9H8Q6 139 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 OSGEPQ9NPF4 335 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 ERVK-18Q9QC07 812 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 XPR1Q9UBH6 696 aa13.56□□□□□ -0.24
LINC00887-202ENST00000414120 TGM5O43548 720 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 RAD1O60671 282 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 MYL9P24844 172 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 HSD3B2P26439 372 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 GDI1P31150 447 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 BRCC3P46736 316 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 NUDT2P50583 147 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 PAPD4Q6PIY7 484 aaKnown RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 TAB3Q8N5C8 712 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF557Q8N988 423 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 ST7LQ8TDW4 575 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 CYGBQ8WWM9 190 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 PAFAH2Q99487 392 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 CCDC154A6NI56 674 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 RFPL4AA6NLU0 287 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 RFPL4AL1F8VTS6 287 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF197O14709 1029 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 NKRFO15226 690 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 HCRTR2O43614 444 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 CNTN5O94779 1100 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 PRPS2P11908 318 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 NDUFB7P17568 137 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 GALNSP34059 522 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 GJA5P36382 358 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 RFX2P48378 723 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 SLC9A5Q14940 896 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF574Q6ZN55 896 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 SIAH1Q8IUQ4 282 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 FAM122AQ96E09 287 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 LRFN5Q96NI6 719 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 MENTQ9BUN1 341 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 KAT8Q9H7Z6 458 aaKnown RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
LINC00887-202ENST00000414120 FAM49BQ9NUQ9 324 aa13.55□□□□□ -0.24
LINC00887-202ENST00000414120 CNTNAP2Q9UHC6 1331 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 TRBV23OR9-2A0A075B6M9 112 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 TMEM191CA6NGB0 347 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 CASC3O15234 703 aaKnown RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 PMPCBO75439 489 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 PAK4O96013 591 aaPredicted RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 RLN2P04090 185 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 MLNP12872 115 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 IDH3AP50213 366 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 CCR9P51686 369 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SNRPD2P62316 118 aaKnown RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 NFYCQ13952 458 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 VEPH1Q14D04 833 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 RFX4Q33E94 735 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 NUDT18Q6ZVK8 323 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 HSD17B13Q7Z5P4 300 aaPredicted RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 NANOGP1Q8N7R0 232 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 TREX2Q9BQ50 279 aaPredicted RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 TRIM9Q9C026 710 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 ENTPD7Q9NQZ7 604 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 TEX13CA0A0J9YWL9 993 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 F5H6K3 240 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 ARNTLO00327 626 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SLC28A1O00337 649 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 CD3EAPO15446 510 aaKnown RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 CYP7B1O75881 506 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SNAPC5O75971 98 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 ARID5AQ03989 594 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 PLCL1Q15111 1095 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SEC23BQ15437 767 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 CDNFQ49AH0 187 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SPANXN2Q5MJ10 180 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SCYL2Q6P3W7 929 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 PDZD4Q76G19 769 aaPredicted RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 SLC26A9Q7LBE3 791 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 GHDCQ8N2G8 530 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 ETNPPLQ8TBG4 499 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 NSUN6Q8TEA1 469 aaKnown RBP13.54□□□□□ -0.24
LINC00887-202ENST00000414120 NR4A3Q92570 626 aa13.54□□□□□ -0.24
LINC00887-202ENST00000414120 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms