RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 EURLQ9NYK6 297 aa25.31■■□□□ 1.64
VEGFA-207ENST00000413642 SLC17A6Q9P2U8 582 aa25.31■■□□□ 1.64
VEGFA-207ENST00000413642 DHCR7Q9UBM7 475 aaKnown RBP25.31■■□□□ 1.64
VEGFA-207ENST00000413642 CFAP46Q8IYW2 2715 aa25.31■■□□□ 1.64
VEGFA-207ENST00000413642 A0A1W2PPV9 198 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 NRP2O60462 931 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 CCNFP41002 786 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 FIGLAQ6QHK4 219 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 SYVN1Q86TM6 617 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 PTRH1Q86Y79 214 aaKnown RBP25.3■■□□□ 1.64
VEGFA-207ENST00000413642 GPR21Q99679 349 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 MIPEPQ99797 713 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 WDR83Q9BRX9 315 aaKnown RBP25.3■■□□□ 1.64
VEGFA-207ENST00000413642 FAM167BQ9BTA0 163 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 RAB11FIP5Q9BXF6 653 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 TRIM31Q9BZY9 425 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 IRAK4Q9NWZ3 460 aa25.3■■□□□ 1.64
VEGFA-207ENST00000413642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.3■■□□□ 1.643e-7■□□□□ 8
VEGFA-207ENST00000413642 SLC28A2O43868 658 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 PSIP1O75475 530 aaKnown RBP25.29■■□□□ 1.64
VEGFA-207ENST00000413642 RECKO95980 971 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 GABRB3P28472 473 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 UGT8Q16880 541 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 LMNTD2Q8IXW0 634 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 OR9A1PQ8NGU1 263 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 HMGCLL1Q8TB92 370 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 CALML6Q8TD86 181 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 ABHD17AQ96GS6 310 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 PKP4Q99569 1192 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 NDNQ99608 321 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 NLNQ9BYT8 704 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 FAM117AQ9C073 453 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 CCDC68Q9H2F9 335 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 MRFAP1Q9Y605 127 aa25.29■■□□□ 1.64
VEGFA-207ENST00000413642 K7EM74 188 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 ZSCAN9O15535 394 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-207ENST00000413642 RAB40ALP0C0E4 278 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 ELK3P41970 407 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CARSP49589 748 aaKnown RBP25.28■■□□□ 1.64
VEGFA-207ENST00000413642 ITGA8P53708 1063 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CYP2A13Q16696 494 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 HIBCHQ6NVY1 386 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CYHR1Q6ZMK1 362 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 SYDE1Q6ZW31 735 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-207ENST00000413642 PRICKLE2Q7Z3G6 844 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CPNE9Q8IYJ1 553 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 C2CD4AQ8NCU7 369 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-207ENST00000413642 OR2A1Q8NGT9 310 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CD200R1Q8TD46 325 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 MAGEC3Q8TD91 643 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 KCNJ9Q92806 393 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CFAP36Q96G28 342 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 AARSD1Q9BTE6 412 aaKnown RBP25.28■■□□□ 1.64
VEGFA-207ENST00000413642 TRIM55Q9BYV6 548 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 SPATA7Q9P0W8 599 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 TUBD1Q9UJT1 453 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 TCFL5Q9UL49 500 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CHMP2BQ9UQN3 213 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 MAN2B2Q9Y2E5 1009 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 DHRS7Q9Y394 339 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 AP1M2Q9Y6Q5 423 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 ZNF462Q96JM2 2506 aa25.28■■□□□ 1.64
VEGFA-207ENST00000413642 CTSVO60911 334 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 DNAJB5O75953 348 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 HBQ1P09105 142 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 MCM3P25205 808 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 PAFAH1B1P43034 410 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 FOXL2P58012 376 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 TIAL1Q01085 375 aaKnown RBP eCLIP25.27■■□□□ 1.64
VEGFA-207ENST00000413642 CHAF1BQ13112 559 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 SLC9A5Q14940 896 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 MORF4L2Q15014 288 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 TTLL9Q3SXZ7 439 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 SPANXN3Q5MJ09 141 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 RHBDD2Q6NTF9 364 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 SUSD1Q6UWL2 747 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 TMEM151BQ8IW70 566 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 RAB42Q8N4Z0 105 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 OR2L3Q8NG85 312 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 C9orf43Q8TAL5 461 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-207ENST00000413642 INPP5DQ92835 1189 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 GBP5Q96PP8 586 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 KRT12Q99456 494 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 ACAT2Q9BWD1 397 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 SNX7Q9UNH6 387 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 HEMK1Q9Y5R4 338 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-207ENST00000413642 SPTBP11277 2137 aa25.27■■□□□ 1.64
VEGFA-207ENST00000413642 CCDC188H7C350 402 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 MYO1CO00159 1063 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 TP73O15350 636 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 NR1D1P20393 614 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 AGXTP21549 392 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 NCF4Q15080 339 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 MLIPQ5VWP3 458 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 CPZQ66K79 652 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 TLDC1Q6P9B6 456 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 PIWIL4Q7Z3Z4 852 aaKnown RBP25.26■■□□□ 1.63
VEGFA-207ENST00000413642 RUNDC3BQ96NL0 473 aa25.26■■□□□ 1.63
VEGFA-207ENST00000413642 INTS7Q9NVH2 962 aaKnown RBP25.26■■□□□ 1.63
VEGFA-207ENST00000413642 KLHL42Q9P2K6 505 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms