RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 HMOX1P09601 288 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CCL5P13501 91 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 S1PR1P21453 382 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MCCP23508 829 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CPT2P23786 658 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PSMA3P25788 255 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 APOBEC1P41238 236 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PSMC4P43686 418 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 THBS3P49746 956 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ASCL1P50553 236 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ZNF41P51814 821 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 DVL1P1P54792 670 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CLDN20P56880 219 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ABATP80404 500 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PRKCZQ05513 592 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LTBQ06643 244 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 BFSP1Q12934 665 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 RALGDSQ12967 914 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GTF2H2Q13888 395 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 KRTCAP3Q53RY4 240 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 NSUN5P2Q63ZY6 315 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PLA2G4FQ68DD2 849 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 NADSYN1Q6IA69 706 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LCN10Q6JVE6 187 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 RPUSD3Q6P087 351 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GTF2H2CQ6P1K8 395 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 KLC3Q6P597 504 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MOXD1Q6UVY6 613 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 OLFM4Q6UX06 510 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MSANTD1Q6ZTZ1 278 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 COPS6Q7L5N1 327 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CENPVQ7Z7K6 275 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SPATA2LQ8IUW3 424 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LINC00346Q8IVM7 164 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PGBD5Q8N414 524 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TDRD5Q8NAT2 981 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 XXYLT1Q8NBI6 393 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 KIF18AQ8NI77 898 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TMED6Q8WW62 240 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ROBO4Q8WZ75 1007 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SMPDL3BQ92485 455 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 FIG4Q92562 907 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ATP6V1E2Q96A05 226 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 VPS33AQ96AX1 596 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CENPTQ96BT3 561 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MOB3AQ96BX8 217 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 OPTNQ96CV9 577 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GRAMD2BQ96HH9 432 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 HES6Q96HZ4 224 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 NSL1Q96IY1 281 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PPP1R13BQ96KQ4 1090 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TTC14Q96N46 770 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ABHD1Q96SE0 405 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CITED2Q99967 270 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ADPGKQ9BRR6 497 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LMF2Q9BU23 707 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 FNDC11Q9BVV2 318 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MTMR12Q9C0I1 747 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MIS12Q9H081 205 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MTIF3Q9H2K0 278 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 C11orf49Q9H6J7 331 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 NOL11Q9H8H0 719 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 EQTNQ9NQ60 294 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 OLFML3Q9NRN5 406 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PAG1Q9NWQ8 432 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SPHK1Q9NYA1 384 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 WSB2Q9NYS7 404 aaPredicted RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 POLLQ9UGP5 575 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TUBE1Q9UJT0 475 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TINAGQ9UJW2 476 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PADI1Q9ULC6 663 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 KIAA0100Q14667 2235 aaKnown RBP2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CASP8AP2Q9UKL3 1982 aa2.5□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CACNA1AO00555 2505 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 RPAP1Q9BWH6 1393 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 AFDNP55196 1824 aaKnown RBP2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 DUOX1Q9NRD9 1551 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 RBBP6Q7Z6E9 1792 aaKnown RBP2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 AKAP11Q9UKA4 1901 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 IGHV4OR15-8A0A075B7B6 117 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 A0A1W2PS18 150 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PRR32B1ATL7 298 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 HNRNPCL2B2RXH8 293 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TMEM189-UBE2V1I3L0A0 370 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CLDN4O14493 209 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CLIC2O15247 247 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ZNF217O75362 1048 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GJB3O75712 270 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CLDN14O95500 239 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 BCL10O95999 233 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PCCAP05165 728 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ADRB2P07550 413 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 NGFRP08138 427 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ACAA1P09110 424 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LINC00271P0C7V0 271 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SAGP10523 405 aaPredicted RBP2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 FOSL2P15408 326 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CSF2RAP15509 400 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 HRH2P25021 359 aa2.49□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PRKAR2BP31323 418 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms