RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CMC1Q7Z7K0 106 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 SLCO6A1Q86UG4 719 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 HPS1Q92902 700 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OTUB2Q96DC9 234 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 PCED1BQ96HM7 432 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 IL1RAPQ9NPH3 570 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 M0R036 132 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 IFNW1P05000 195 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 GNA12Q03113 381 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 DNM1P34Q6PK57 102 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 CUZD1Q86UP6 607 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OR2L2Q8NH16 312 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 HNRNPLLQ8WVV9 542 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ZFP3Q96NJ6 502 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF69Q9UC07 566 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 RAP2CQ9Y3L5 183 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 DNMT3AQ9Y6K1 912 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 CBFA2T3O75081 653 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 CORO7P57737 925 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF460Q14592 562 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 MAD2L1BPQ15013 274 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 SPDYCQ5MJ68 293 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 PRPF38BQ5VTL8 546 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 FKBP1CQ5VVH2 108 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 PGM2L1Q6PCE3 622 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 DHDDSQ86SQ9 333 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 RASGEF1CQ8N431 466 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 JAGN1Q8N5M9 183 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OR2T12Q8NG77 320 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 AKAP1Q92667 903 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 KCTD15Q96SI1 283 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 SMG9Q9H0W8 520 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 GBA3Q9H227 469 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 IPPKQ9H8X2 491 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 BACE2Q9Y5Z0 518 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 PARP4Q9UKK3 1724 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 C3orf33Q6P1S2 294 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 AHSA2Q719I0 299 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 MINDY2Q8NBR6 621 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 DENND1AQ8TEH3 1009 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 SLC38A4Q969I6 547 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 P2RY11Q96G91 374 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 BTBD1Q9H0C5 482 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 A0A1B0GVM2 712 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 TCAF2A6NFQ2 919 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 CLCNKAP51800 687 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 CDH12P55289 794 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 MAZP56270 477 aaKnown RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 GDPD4Q6W3E5 623 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 DPEP3Q9H4B8 488 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 FARSBQ9NSD9 589 aaKnown RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 PADI2Q9Y2J8 665 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 LHCGRP22888 699 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 PDK4Q16654 411 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 SLC22A18Q96BI1 424 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 SH3YL1Q96HL8 342 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 FZD3Q9NPG1 666 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 ELOVL7A1L3X0 281 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 MPPED1O15442 326 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 FAM155BO75949 473 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 TACSTD2P09758 323 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 GBX2P52951 348 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 XIAPP98170 497 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF676Q8N7Q3 588 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 MKL1Q969V6 931 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 RIPK3Q9Y572 518 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 PTCH2Q9Y6C5 1203 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 A6NLC8 198 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 TRIM64CA6NLI5 447 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 C9JVG2 144 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 TSPAN4O14817 238 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 SNU13P55769 128 aaKnown RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 TAS2R40P59535 323 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 CREB5Q02930 508 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 USP30Q70CQ3 517 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 AKAP14Q86UN6 197 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 ZBTB8BQ8NAP8 495 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 ASPNQ9BXN1 380 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 SLC32A1Q9H598 525 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 CALML5Q9NZT1 146 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 FBXO5Q9UKT4 447 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 MDFIC2A0A1B0GVS7 189 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
PRPF40A-202ENST00000410080 C8GP07360 202 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 SLC9B2Q86UD5 537 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 UFD1Q92890 307 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 RGMAQ96B86 450 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 TOR3AQ9H497 397 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 INSL6Q9Y581 213 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 NUP205Q92621 2012 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 INPPL1O15357 1258 aa11□□□□□ -0.65
PRPF40A-202ENST00000410080 GRM5P41594 1212 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms