RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MED13Q9UHV7 2174 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 A0A1W2PPV9 198 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 ARHGEF33A8MVX0 844 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 E5RI56 91 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 K7EM74 188 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 ZSCAN9O15535 394 aaPredicted RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 HAUS5O94927 633 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 PSMB5P28074 263 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 GRIA3P42263 894 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 PMS2P54278 862 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 MPP1Q00013 466 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 DHX9Q08211 1270 aaKnown RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 FASTKQ14296 549 aaKnown RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 HSP90AA5PQ58FG0 334 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 C1orf189Q5VU69 101 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 FIGLAQ6QHK4 219 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 MCATQ8IVS2 390 aaKnown RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 IGDCC3Q8IVU1 814 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 KLHL7Q8IXQ5 586 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 ZNF655Q8N720 491 aaPredicted RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
LSM5-204ENST00000409909 ADAMTS17Q8TE56 1095 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 SEC14L1Q92503 715 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 DPH2Q9BQC3 489 aaPredicted RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.02■□□□□ 0.32
LSM5-204ENST00000409909 FBXO5Q9UKT4 447 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 MRFAP1Q9Y605 127 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 SAR1BQ9Y6B6 198 aa17.02■□□□□ 0.32
LSM5-204ENST00000409909 MYO18BQ8IUG5 2567 aa17.02■□□□□ 0.31
LSM5-204ENST00000409909 SPENQ96T58 3664 aaKnown RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 UBR5O95071 2799 aaPredicted RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 CCDC88CQ9P219 2028 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 PSIP1O75475 530 aaKnown RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 DNAJB5O75953 348 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 PGAM1P18669 254 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 GCGRP47871 477 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 YBX1P67809 324 aaKnown RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 CUL1Q13616 776 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 CRYMQ14894 314 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 NCF4Q15080 339 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 CYP2A13Q16696 494 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 TLDC1Q6P9B6 456 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 PCGF5Q86SE9 256 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 APLFQ8IW19 511 aaPredicted RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 LMNTD2Q8IXW0 634 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 OR2A1Q8NGT9 310 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 MAGEC3Q8TD91 643 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 THAP4Q8WY91 577 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 KCNJ9Q92806 393 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 PWWP2AQ96N64 755 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 GBP5Q96PP8 586 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 NAPGQ99747 312 aaPredicted RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 EBNA1BP2Q99848 306 aaKnown RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 TRIM55Q9BYV6 548 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 PLAC1Q9HBJ0 212 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 IARS2Q9NSE4 1012 aaKnown RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 KLHL42Q9P2K6 505 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 DHCR7Q9UBM7 475 aaKnown RBP17.01■□□□□ 0.31
LSM5-204ENST00000409909 TLK1Q9UKI8 766 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 SNX7Q9UNH6 387 aa17.01■□□□□ 0.31
LSM5-204ENST00000409909 MYO1CO00159 1063 aa17■□□□□ 0.31
LSM5-204ENST00000409909 CTSVO60911 334 aa17■□□□□ 0.31
LSM5-204ENST00000409909 KLF7O75840 302 aaPredicted RBP17■□□□□ 0.31
LSM5-204ENST00000409909 ERVK-10P10266 1014 aa17■□□□□ 0.31
LSM5-204ENST00000409909 ERGP11308 486 aa17■□□□□ 0.31
LSM5-204ENST00000409909 NR1D1P20393 614 aa17■□□□□ 0.31
LSM5-204ENST00000409909 AGXTP21549 392 aa17■□□□□ 0.31
LSM5-204ENST00000409909 TIAL1Q01085 375 aaKnown RBP eCLIP17■□□□□ 0.31
LSM5-204ENST00000409909 PCM1Q15154 2024 aa17■□□□□ 0.31
LSM5-204ENST00000409909 CPZQ66K79 652 aa17■□□□□ 0.31
LSM5-204ENST00000409909 CYHR1Q6ZMK1 362 aa17■□□□□ 0.31
LSM5-204ENST00000409909 KCNMB4Q86W47 210 aa17■□□□□ 0.31
LSM5-204ENST00000409909 OR2L3Q8NG85 312 aa17■□□□□ 0.31
LSM5-204ENST00000409909 OR9A1PQ8NGU1 263 aa17■□□□□ 0.31
LSM5-204ENST00000409909 CALML6Q8TD86 181 aa17■□□□□ 0.31
LSM5-204ENST00000409909 ZUFSPQ96AP4 578 aa17■□□□□ 0.31
LSM5-204ENST00000409909 GPR21Q99679 349 aa17■□□□□ 0.31
LSM5-204ENST00000409909 MIPEPQ99797 713 aa17■□□□□ 0.31
LSM5-204ENST00000409909 INTS7Q9NVH2 962 aaKnown RBP17■□□□□ 0.31
LSM5-204ENST00000409909 SPATA7Q9P0W8 599 aa17■□□□□ 0.31
LSM5-204ENST00000409909 TP53TG5Q9Y2B4 290 aa17■□□□□ 0.31
LSM5-204ENST00000409909 DHRS7Q9Y394 339 aa17■□□□□ 0.31
LSM5-204ENST00000409909 KLK4Q9Y5K2 254 aa17■□□□□ 0.31
LSM5-204ENST00000409909 PRRC2CQ9Y520 2896 aaKnown RBP17■□□□□ 0.31
LSM5-204ENST00000409909 PCSK5Q92824 1860 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 TARM1B6A8C7 271 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 NRP2O60462 931 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 RFPL1O75677 317 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 FKBP9O95302 570 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 ZIC2O95409 532 aaPredicted RBP16.99■□□□□ 0.31
LSM5-204ENST00000409909 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 GABRB3P28472 473 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 DR1Q01658 176 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 CHAF1BQ13112 559 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 BBS9Q3SYG4 887 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 LACTB2Q53H82 288 aaPredicted RBP16.99■□□□□ 0.31
LSM5-204ENST00000409909 ATG14Q6ZNE5 492 aa16.99■□□□□ 0.31
LSM5-204ENST00000409909 SYDE1Q6ZW31 735 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms