RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CELA2BP08218 269 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-204ENST00000409727 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 CD1EP15812 388 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 NEK2P51955 445 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 IRF8Q02556 426 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 TAP2Q03519 686 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 RPE65Q16518 533 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 METTL21CQ5VZV1 264 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 LARP4Q71RC2 724 aaKnown RBP eCLIP12.07□□□□□ -0.487e-6■□□□□ 9
CHMP3-204ENST00000409727 EFL1Q7Z2Z2 1120 aaKnown RBP12.07□□□□□ -0.48
CHMP3-204ENST00000409727 TBC1D21Q8IYX1 336 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 RGL4Q8IZJ4 473 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 POU5F2Q8N7G0 328 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 CADM4Q8NFZ8 388 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 JPH3Q8WXH2 748 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-204ENST00000409727 NEIL2Q969S2 332 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 CCDC177Q9NQR7 707 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-204ENST00000409727 TXLNGQ9NUQ3 528 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 TRPS1Q9UHF7 1281 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 ZNF490Q9ULM2 529 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-204ENST00000409727 SH2B3Q9UQQ2 575 aa12.07□□□□□ -0.48
CHMP3-204ENST00000409727 LOC100653049A0A140TA62 436 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 TOR1BO14657 336 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 ULK1O75385 1050 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 KRT34O76011 436 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 UNC5CO95185 931 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 WNT1P04628 370 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 ESRRAP11474 423 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 NUDT1P36639 197 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 FNTBP49356 437 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 NME5P56597 212 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 NCALDP61601 193 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 ILF3Q12906 894 aaKnown RBP eCLIP12.06□□□□□ -0.485e-7■■■■□ 23.6
CHMP3-204ENST00000409727 C1orf61Q13536 156 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 LRP8Q14114 963 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 TMPRSS11BQ86T26 416 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 PHACTR4Q8IZ21 702 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 KIF2BQ8N4N8 673 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 EDAQ92838 391 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 NSL1Q96IY1 281 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 COPG1Q9Y678 874 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 KCNE2Q9Y6J6 123 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 CAPN7Q9Y6W3 813 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 GON4LQ3T8J9 2241 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 MANBAO00462 879 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 MTHFD1P11586 935 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 CTSEP14091 401 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 NPPBP16860 134 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 CD22P20273 847 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 VARSP26640 1264 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 CD38P28907 300 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 HMGCS1Q01581 520 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 DOC2AQ14183 400 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 KRT72Q14CN4 511 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 ZRSR2Q15696 482 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 CATSPEREQ5SY80 951 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 NRROSQ86YC3 692 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 LRRC56Q8IYG6 542 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 PTCD3Q96EY7 689 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 CAMK1GQ96NX5 476 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 C1orf50Q9BV19 199 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 ELOVL6Q9H5J4 265 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 TRNAU1APQ9NX07 287 aaKnown RBP12.06□□□□□ -0.48
CHMP3-204ENST00000409727 DYRK1BQ9Y463 629 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 DGKBQ9Y6T7 804 aa12.06□□□□□ -0.48
CHMP3-204ENST00000409727 DNAH14Q0VDD8 3507 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 ABCA7Q8IZY2 2146 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 PDYNP01213 254 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 ALDOCP09972 364 aaKnown RBP12.05□□□□□ -0.48
CHMP3-204ENST00000409727 LBPP18428 481 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 GNAZP19086 355 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 PSMB5P28074 263 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 YBX1P67809 324 aaKnown RBP12.05□□□□□ -0.48
CHMP3-204ENST00000409727 MEF2AQ02078 507 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-204ENST00000409727 KLF10Q13118 480 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 SRSF5Q13243 272 aaKnown RBP12.05□□□□□ -0.48
CHMP3-204ENST00000409727 DDX39BQ13838 428 aaKnown RBP12.05□□□□□ -0.48
CHMP3-204ENST00000409727 NR6A1Q15406 480 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 KIF19Q2TAC6 998 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 XKR7Q5GH72 579 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 SLC36A4Q6YBV0 504 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 TAF8Q7Z7C8 310 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 PARGQ86W56 976 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 SFTPA2Q8IWL1 248 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 SFRP1Q8N474 314 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 RNF175Q8N4F7 328 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 L3MBTL4Q8NA19 623 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 OR52E1Q8NGJ3 308 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 SELENOMQ8WWX9 145 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 STON2Q8WXE9 905 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 PFDN4Q9NQP4 134 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 RIC8BQ9NVN3 520 aa12.05□□□□□ -0.48
CHMP3-204ENST00000409727 TAC3Q9UHF0 121 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms