RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SYNDIG1Q9H7V2 258 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 SSU72Q9NP77 194 aaKnown RBP16.08■□□□□ 0.16
SUMO1-208ENST00000409627 ACTR10Q9NZ32 417 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 CD274Q9NZQ7 290 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 EMCNQ9ULC0 261 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 TMCO1Q9UM00 188 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 DMXL1Q9Y485 3027 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 UNC13CQ8NB66 2214 aa16.08■□□□□ 0.16
SUMO1-208ENST00000409627 A0A1W2PPV9 198 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 GSAPA4D1B5 854 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 NCF1BA6NI72 391 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 NCF1CA8MVU1 366 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 TARM1B6A8C7 271 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 TK2O00142 265 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CASC3O15234 703 aaKnown RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CAPN5O15484 640 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 PRICKLE3O43900 615 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 KLK8O60259 260 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 C9P02748 559 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 NCF1P14598 390 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CREB1P16220 341 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CCND1P24385 295 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 PEBP1P30086 187 aaKnown RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 INSM1Q01101 510 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CCDC153Q494R4 210 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CCDC157Q569K6 752 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 SULT1C3Q6IMI6 304 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 C16orf46Q6P387 395 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 TMEM71Q6P5X7 295 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 USP53Q70EK8 1073 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 KLHDC8AQ8IYD2 350 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 PPFIBP2Q8ND30 876 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 OR4D9Q8NGE8 314 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 OR56A3Q8NH54 315 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 TLCD1Q96CP7 247 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 ZDHHC12Q96GR4 267 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CD180Q99467 661 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 ZMYND15Q9H091 742 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 IQCGQ9H095 443 aaKnown RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 CCDC177Q9NQR7 707 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 SPHK1Q9NYA1 384 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 POMT2Q9UKY4 750 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 ATXN7L1Q9ULK2 861 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-208ENST00000409627 PIEZO1Q92508 2521 aa16.07■□□□□ 0.16
SUMO1-208ENST00000409627 TYROBPO43914 113 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 PLIN3O60664 434 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 IPO13O94829 963 aaKnown RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 FKBP9O95302 570 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 PROCP04070 461 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 SBK3P0C264 359 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 OAS2P29728 719 aaKnown RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 GGT5P36269 586 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 GFERP55789 205 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 TBPL1P62380 186 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 SLC5A12Q1EHB4 618 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 ZXDCQ2QGD7 858 aaPredicted RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 CDCP2Q5VXM1 449 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 IRGCQ6NXR0 463 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 RBM44Q6ZP01 1051 aaKnown RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 TAX1BP1Q86VP1 789 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 CARFQ8N187 725 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 C2orf73Q8N5S3 287 aaPredicted RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 LMNTD1Q8N9Z9 388 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 FLVCR1-AS1Q8TAF5 88 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 UBTD2Q8WUN7 234 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 OR2A14Q96R47 310 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 TMEM79Q9BSE2 394 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 SGPP1Q9BX95 441 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 ATG10Q9H0Y0 220 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 WWOXQ9NZC7 414 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 CPSF2Q9P2I0 782 aaKnown RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 PDP2Q9P2J9 529 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 PTBP2Q9UKA9 531 aaKnown RBP16.06■□□□□ 0.16
SUMO1-208ENST00000409627 PLLPQ9Y342 182 aa16.06■□□□□ 0.16
SUMO1-208ENST00000409627 DCDC2BA2VCK2 349 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 ISM1B1AKI9 464 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 TAPBPO15533 448 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 ATP8B1O43520 1251 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SMIM24O75264 130 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SPAG7O75391 227 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SNRNP200O75643 2136 aaKnown RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 GFAPP14136 432 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 HOXB3P14651 431 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 UGT2B7P16662 529 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 TAC1P20366 129 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 PRDX3P30048 256 aaKnown RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SLC6A12P48065 614 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 ALDH18A1P54886 795 aaKnown RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 PPP1CAP62136 330 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 NAE1Q13564 534 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SETDB1Q15047 1291 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 CAPN13Q6MZZ7 669 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SPESP1Q6UW49 350 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 DHRS13Q6UX07 377 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 ZNF574Q6ZN55 896 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 TMPRSS9Q7Z410 1059 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms