RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 RASGEF1AQ8N9B8 481 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 RBM15BQ8NDT2 890 aaKnown RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 UBE2E3Q969T4 207 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 KIAA1191Q96A73 305 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 CACNA1CQ13936 2221 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 ZSWIM8A7E2V4 1837 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 TMEM202A6NGA9 273 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 NKX3-2P78367 333 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 BTN3A2P78410 334 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 MAD2L1Q13257 205 aaPredicted RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 ADGRE1Q14246 886 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 TMEM196Q5HYL7 178 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 BHLHE22Q8NFJ8 381 aaPredicted RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 OR4K1Q8NGD4 311 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 NACC2Q96BF6 587 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 CENPTQ96BT3 561 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 DNAJA3Q96EY1 480 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 DPH7Q9BTV6 452 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 APOOQ9BUR5 198 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 SLC32A1Q9H598 525 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 SERGEFQ9UGK8 458 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 WARS2Q9UGM6 360 aaKnown RBP11.1□□□□□ -0.63
SNX13-202ENST00000409604 SH3GLB1Q9Y371 365 aa11.1□□□□□ -0.63
SNX13-202ENST00000409604 OTOFQ9HC10 1997 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 PRLP01236 227 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 JUNP05412 331 aaKnown RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 NR2F1P10589 423 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 CCNA2P20248 432 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 NTSP30990 170 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 HTR6P50406 440 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 VSX2P58304 361 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 NRF1Q16656 503 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 WDR45BQ5MNZ6 344 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 TNFAIP8L2Q6P589 184 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 SHISA6Q6ZSJ9 500 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 ISCA2Q86U28 154 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 OR4N5Q8IXE1 308 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 CAMKK1Q8N5S9 505 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 WDR83Q9BRX9 315 aaKnown RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 Q9H521 79 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 DDX18Q9NVP1 670 aaKnown RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 TRPM6Q9BX84 2022 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 NRG2O14511 850 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 TYROBPO43914 113 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 ME2P23368 584 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 FEN1P39748 380 aaKnown RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 KIR3DL1P43629 444 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 TPMTP51580 245 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 CTBSQ01459 385 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 NNATQ16517 81 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 DEFB134Q4QY38 66 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 CATSPEREQ5SY80 951 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 TMIGD1Q6UXZ0 262 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 ZSWIM9Q86XI8 627 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 OR9A1PQ8NGU1 263 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 SLC13A3Q8WWT9 602 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 RAB7BQ96AH8 199 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 PRR11Q96HE9 360 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 FARSBQ9NSD9 589 aaKnown RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 SELENONQ9NZV5 590 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 ADAMTS6Q9UKP5 1117 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 GPR34Q9UPC5 381 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 CHURC1-FNTBB4DL54 471 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 UBTFL6P0CB48 400 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 UROSP10746 265 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 NDUFV2P19404 249 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 PSMA4P25789 261 aaKnown RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 KRT20P35900 424 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 FNTBP49356 437 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 C1orf189Q5VU69 101 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 FRG2Q64ET8 278 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 LIMS2Q7Z4I7 341 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 ZNF655Q8N720 491 aaPredicted RBP11.09□□□□□ -0.63
SNX13-202ENST00000409604 OR4A15Q8NGL6 344 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 HM13Q8TCT9 377 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 FRG2BQ96QU4 278 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 TRMOQ9BU70 441 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 ALG2Q9H553 416 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 MTCH2Q9Y6C9 303 aa11.09□□□□□ -0.63
SNX13-202ENST00000409604 SLC28A1O00337 649 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 NRP2O60462 931 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 TPST2O60704 377 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 MMP2P08253 660 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 ZNF140P52738 457 aaPredicted RBP11.08□□□□□ -0.64
SNX13-202ENST00000409604 TBPL1P62380 186 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 CDK3Q00526 305 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 PAGE2Q7Z2X7 111 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 DHFR2Q86XF0 187 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 ATG16L2Q8NAA4 619 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 ATP6V1C2Q8NEY4 427 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 VANGL1Q8TAA9 524 aaPredicted RBP11.08□□□□□ -0.64
SNX13-202ENST00000409604 THAP3Q8WTV1 239 aaPredicted RBP11.08□□□□□ -0.64
SNX13-202ENST00000409604 DTD2Q96FN9 168 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 AURKBQ96GD4 344 aaPredicted RBP11.08□□□□□ -0.64
SNX13-202ENST00000409604 FAM92AA1XBS5 289 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 FAM149AA5PLN7 773 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 TTC36A6NLP5 189 aa11.08□□□□□ -0.64
SNX13-202ENST00000409604 KCNH1O95259 989 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms