RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 DNAJB7Q7Z6W7 309 aaPredicted RBP10.96□□□□□ -0.65
ITGA6-203ENST00000409532 NPAS4Q8IUM7 802 aa10.96□□□□□ -0.65
ITGA6-203ENST00000409532 ABHD11Q8NFV4 315 aa10.96□□□□□ -0.65
ITGA6-203ENST00000409532 MCOLN3Q8TDD5 553 aa10.96□□□□□ -0.65
ITGA6-203ENST00000409532 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
ITGA6-203ENST00000409532 SH3GL1Q99961 368 aa10.96□□□□□ -0.65
ITGA6-203ENST00000409532 TUBA1CQ9BQE3 449 aa10.96□□□□□ -0.65
ITGA6-203ENST00000409532 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 EBLN1P0CF75 366 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 IGFBP5P24593 272 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 CST5P28325 142 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 GRSF1Q12849 480 aaKnown RBP eCLIP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 INO80DQ53TQ3 878 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 LRRC66Q68CR7 880 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 GTF2IRD2BQ6EKJ0 949 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 SERPINA13PQ6UXR4 307 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 GTF2IRD2Q86UP8 949 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 NXPE1Q8N323 547 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 TMEM132CQ8N3T6 1108 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 BEND7Q8N7W2 519 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 TERB1Q8NA31 727 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 OR5K1Q8NHB7 308 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 TPD52L3Q96J77 140 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 MTERF1Q99551 399 aaKnown RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 SMG9Q9H0W8 520 aaKnown RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 SERHLQ9NQF3 203 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 TMEFF2Q9UIK5 374 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 BLOC1S6Q9UL45 172 aa10.96□□□□□ -0.66
ITGA6-203ENST00000409532 PNMA8BQ9ULN7 279 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-203ENST00000409532 NTRK1P04629 796 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CKMP06732 381 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SDC1P18827 310 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 PSMA3P25788 255 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 PSMB9P28065 219 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CD70P32970 193 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TGFBR1P36897 503 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SPAM1P38567 509 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 GP2P55259 537 aaKnown RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 EMX1Q04741 257 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF648Q5T619 568 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 PRR23BQ6ZRT6 265 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 GPR149Q86SP6 731 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 IGFN1Q86VF2 1251 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 AADATQ8N5Z0 425 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 GLMNQ92990 594 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 PYURFQ96I23 114 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CCDC115Q96NT0 180 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 PANX1Q96RD7 426 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CWH43Q9H720 699 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TRNAU1APQ9NX07 287 aaKnown RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TMEM9Q9P0T7 183 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 NDUFS2O75306 463 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ATP6V1G1O75348 118 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 FADS2O95864 444 aaKnown RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 IDUAP35475 653 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 VBP1P61758 197 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CD300CQ08708 224 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SREBF2Q12772 1141 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 MTA1Q13330 715 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TSTA3Q13630 321 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SLC8B1Q6J4K2 584 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 RETSATQ6NUM9 610 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TRIM46Q7Z4K8 759 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CLECL1Q8IZS7 167 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ZCCHC7Q8N3Z6 543 aaKnown RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF461Q8TAF7 563 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 CPPED1Q9BRF8 314 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 C2orf49Q9BVC5 232 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 AMBNQ9NP70 447 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 MTRRQ9UBK8 725 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF451Q9Y4E5 1061 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 OR51B4Q9Y5P0 310 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 GRXCR2A6NFK2 248 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 PQBP1O60828 265 aaKnown RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 AP1S1P61966 158 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SMARCB1Q12824 385 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TTLL9Q3SXZ7 439 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 TMEM236Q5W0B7 351 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 LAIR1Q6GTX8 287 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 NEK5Q6P3R8 708 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SLC16A12Q6ZSM3 486 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SLCO6A1Q86UG4 719 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SVOPLQ8N434 492 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 HJURPQ8NCD3 748 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 GLB1L3Q8NCI6 653 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 NDNFQ8TB73 568 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 NTMT1Q9BV86 223 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 REXO4Q9GZR2 422 aaKnown RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 SLC32A1Q9H598 525 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF334Q9HCZ1 680 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-203ENST00000409532 AASDHPPTQ9NRN7 309 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 ZNF510Q9Y2H8 683 aa10.95□□□□□ -0.66
ITGA6-203ENST00000409532 FUOMA2VDF0 154 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 PABPN1LA6NDY0 278 aaKnown RBP10.94□□□□□ -0.66
ITGA6-203ENST00000409532 PRAMEF4O60810 478 aa10.94□□□□□ -0.66
ITGA6-203ENST00000409532 HPRP00739 348 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms