RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 USP50Q70EL3 339 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLC9B2Q86UD5 537 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 APOBEC3FQ8IUX4 373 aaKnown RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 TBC1D10CQ8IV04 446 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 GUF1Q8N442 669 aaKnown RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 GBGT1Q8N5D6 347 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 C1orf52Q8N6N3 182 aaKnown RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 SYT2Q8N9I0 419 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 AVL9Q8NBF6 648 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 MCUQ8NE86 351 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 LNX1Q8TBB1 728 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 LPGAT1Q92604 370 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 ESR2Q92731 530 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 PHF21AQ96BD5 680 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 JAKMIP1Q96N16 626 aaKnown RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 TXLNGYQ9BZA5 131 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 EBF2Q9HAK2 575 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 TCP11L1Q9NUJ3 509 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 MORF4L1Q9UBU8 362 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 AMACRQ9UHK6 382 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 DLGAP4Q9Y2H0 992 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 PCDHAC2Q9Y5I4 1007 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 PAPPA2Q9BXP8 1791 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 CNTNAP1P78357 1384 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 PLIN4Q96Q06 1357 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 OTOFQ9HC10 1997 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 LOC100509620A0A075B734 347 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 SMTNL1A8MU46 457 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 PLOD3O60568 738 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 KRT19P08727 400 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 DNASE1P24855 282 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 EPS15P42566 896 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 SNRPEP62304 92 aaKnown RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TROAPQ12815 778 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ASIC2Q16515 512 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TMEM266Q2M3C6 531 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ADALQ6DHV7 355 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TMEM211Q6ICI0 200 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF704Q6ZNC4 412 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TUBA1AQ71U36 451 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 IQCA1Q86XH1 822 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 CEP57Q86XR8 500 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZBTB8BQ8NAP8 495 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 RBM15BQ8NDT2 890 aaKnown RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 WDR20Q8TBZ3 569 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TAS1R2Q8TE23 839 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 PPP4R1Q8TF05 950 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TMEM255BQ8WV15 326 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 SECTM1Q8WVN6 248 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 PTERQ96BW5 349 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ERLEC1Q96DZ1 483 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 OXNAD1Q96HP4 312 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF582Q96NG8 517 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 DGAT2Q96PD7 388 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLC22A12Q96S37 553 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TUBA1CQ9BQE3 449 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 UPF3BQ9BZI7 483 aaKnown RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLA2Q9H6Q3 261 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLC35C2Q9NQQ7 365 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 KLHL1Q9NR64 748 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 PDRG1Q9NUG6 133 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 MARCH4Q9P2E8 410 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 PPIEQ9UNP9 301 aaKnown RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 WBP11Q9Y2W2 641 aaKnown RBP4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF711Q9Y462 761 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 TRPV2Q9Y5S1 764 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 PARP14Q460N5 1801 aa4.74□□□□□ -1.65
HMGB3P19-201ENST00000403971 NEDD4P46934 1319 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 CLRN2A0PK11 232 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 ERICH2A1L162 156 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 TCP10L2B9ZVM9 353 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 TO15178 435 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 PSMD10O75832 226 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 BMP10O95393 424 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 GCNT3O95395 438 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 TPOP07202 933 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 SNRNP70P08621 437 aaKnown RBP4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 VPREB1P12018 145 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 NR2F2P24468 414 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 TKTP29401 623 aaKnown RBP4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 GABRA5P31644 462 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 EPHX2P34913 555 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 ARCN1P48444 511 aaKnown RBP4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 NOVP48745 357 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 LMAN1P49257 510 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 LIG4P49917 911 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 ARSEP51690 589 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF132P52740 706 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 PPP5CP53041 499 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 CDH13P55290 713 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 TCP10Q12799 353 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 HNRNPA0Q13151 305 aaKnown RBP4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 MELKQ14680 651 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 KIAA1161Q6NSJ0 714 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLC30A6Q6NXT4 461 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 RPUSD3Q6P087 351 aaKnown RBP4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 TATDN1Q6P1N9 297 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 PLPPR4Q7Z2D5 763 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 HSCBQ8IWL3 235 aa4.73□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF444Q8N0Y2 327 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms