RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KLHL35Q6PF15 583 aa32.2■■■□□ 2.75
CSNK1E-204ENST00000403904 USP53Q70EK8 1073 aa32.2■■■□□ 2.75
CSNK1E-204ENST00000403904 NCSTNQ92542 709 aa32.2■■■□□ 2.75
CSNK1E-204ENST00000403904 MED8Q96G25 268 aa32.2■■■□□ 2.75
CSNK1E-204ENST00000403904 CDV3Q9UKY7 258 aaKnown RBP32.2■■■□□ 2.75
CSNK1E-204ENST00000403904 TMEM120BA0PK00 339 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 ZNF839A8K0R7 811 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 G3V2L1 256 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 KLK8O60259 260 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 RPLP0P05388 317 aaKnown RBP32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 TAC1P20366 129 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 HPDP32754 393 aaPredicted RBP32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 CAPZBP47756 277 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 AGTR2P50052 363 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 TCAIMQ8N3R3 496 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 SMPDL3AQ92484 453 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 FAM122AQ96E09 287 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 TMEM79Q9BSE2 394 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 A0A1W2PQM1 296 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 PIPSLA2A3N6 862 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 GSAPA4D1B5 854 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 DUX1O43812 170 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 DLX3O60479 287 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 PEBP1P30086 187 aaKnown RBP32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 TBPL1P62380 186 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 PTCHD3Q3KNS1 767 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 PTGR2Q8N8N7 351 aaPredicted RBP32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 SELENOSQ9BQE4 189 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 LRRN3Q9H3W5 708 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 EPB41L1Q9H4G0 881 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 SYNDIG1Q9H7V2 258 aa32.19■■■□□ 2.74
CSNK1E-204ENST00000403904 A0A1W2PPV9 198 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 A8MT66 165 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 MYL2P10916 166 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 CSRP1P21291 193 aaKnown RBP32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 GDF5P43026 501 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 HSPA7P48741 367 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 ALDH18A1P54886 795 aaKnown RBP32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 PPP1CAP62136 330 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 PRKAA1Q13131 559 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 HSP90B2PQ58FF3 399 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 GLRX5Q86SX6 157 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 ALYREFQ86V81 257 aaKnown RBP32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 ANKRD42Q8N9B4 389 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 OR56A3Q8NH54 315 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 TOR4AQ9NXH8 423 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 ATXN7L1Q9ULK2 861 aaPredicted RBP32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 ASB1Q9Y576 335 aa32.18■■■□□ 2.74
CSNK1E-204ENST00000403904 TM9SF1O15321 606 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ZWINTO95229 277 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 CPA3P15088 417 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ATP5F1P24539 256 aaPredicted RBP32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ETV4P43268 484 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 CFHR1Q03591 330 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 SETDB1Q15047 1291 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ARMC6Q6NXE6 501 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ZYG11AQ6WRX3 759 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 RDH11Q8TC12 318 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 TWSG1Q9GZX9 223 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ZMYND15Q9H091 742 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 CCDC177Q9NQR7 707 aaPredicted RBP32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 INTS7Q9NVH2 962 aaKnown RBP32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 COPG2Q9UBF2 871 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 TMCO1Q9UM00 188 aa32.17■■■□□ 2.74
CSNK1E-204ENST00000403904 ISM1B1AKI9 464 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 PSMB5P28074 263 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 GGT5P36269 586 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 SLC6A12P48065 614 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 ACAT2Q9BWD1 397 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 ABCG4Q9H172 646 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 CNOT10Q9H9A5 744 aaKnown RBP32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 MED4Q9NPJ6 270 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 ACTR10Q9NZ32 417 aa32.16■■■□□ 2.74
CSNK1E-204ENST00000403904 LRRC14BA6NHZ5 514 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 SIX3O95343 332 aaPredicted RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 CSF2RBP32927 897 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 RSPO4Q2I0M5 234 aaPredicted RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 THEMIS2Q5TEJ8 643 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 CAPN13Q6MZZ7 669 aaPredicted RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 IRGCQ6NXR0 463 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 NUDT22Q9BRQ3 303 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 CD244Q9BZW8 370 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 MLXIPLQ9NP71 852 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 SNRNP200O75643 2136 aaKnown RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 SPAARA0A1B0GVQ0 90 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 C2orf74A8MZ97 194 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 CAPN5O15484 640 aaPredicted RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 PRICKLE3O43900 615 aaPredicted RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 RFPL3O75679 317 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 IPO13O94829 963 aaKnown RBP32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 KCNA4P22459 653 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 GFERP55789 205 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 GPS2Q13227 327 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 KIR2DS3Q14952 304 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 PCLAFQ15004 111 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 SGPP1Q9BX95 441 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 MID2Q9UJV3 735 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 SLC22A14Q9Y267 594 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 ENTPD2Q9Y5L3 495 aa32.15■■■□□ 2.74
CSNK1E-204ENST00000403904 H3BQF6 201 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms