RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 WDR34Q96EX3 536 aa18.45■□□□□ 0.54
TSPAN4-204ENST00000397404 CAMK1GQ96NX5 476 aa18.45■□□□□ 0.54
TSPAN4-204ENST00000397404 EFCAB11Q9BUY7 163 aa18.45■□□□□ 0.54
TSPAN4-204ENST00000397404 PRDM8Q9NQV8 689 aa18.45■□□□□ 0.54
TSPAN4-204ENST00000397404 ZSCAN32Q9NX65 697 aa18.45■□□□□ 0.54
TSPAN4-204ENST00000397404 DNAJC15Q9Y5T4 150 aa18.45■□□□□ 0.54
TSPAN4-204ENST00000397404 CCT8L1PA6NM43 557 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 YKT6O15498 198 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 CCNDBP1O95273 360 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 CXCR2P25025 360 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 ARL1P40616 181 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 GDF5P43026 501 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 CCR10P46092 362 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 NAA25Q14CX7 972 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 TAF8Q7Z7C8 310 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 SLC9B2Q86UD5 537 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 NRROSQ86YC3 692 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 LRRC56Q8IYG6 542 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 MAML2Q8IZL2 1156 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 OR52B6Q8NGF0 335 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 CEP76Q8TAP6 659 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 MED8Q96G25 268 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 METTL2AQ96IZ6 378 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 ATG10Q9H0Y0 220 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 INTS7Q9NVH2 962 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 TAAR2Q9P1P5 351 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 HEY2Q9UBP5 337 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 INVSQ9Y283 1065 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 TDRKHQ9Y2W6 561 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 ASB1Q9Y576 335 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 CSNK1G3Q9Y6M4 447 aa18.44■□□□□ 0.54
TSPAN4-204ENST00000397404 HNRNPCL1O60812 293 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ULK1O75385 1050 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ATP5HO75947 161 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 WFS1O76024 890 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 KIAA0754O94854 1291 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 WNT1P04628 370 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 JUPP14923 745 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 PKLRP30613 574 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ERVPABLB-1P60509 514 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ABATP80404 500 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 IRF8Q02556 426 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 BTKQ06187 659 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 DMWDQ09019 674 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 PEAR1Q5VY43 1037 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 SLC30A9Q6PML9 568 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ZNF771Q7L3S4 317 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 TRIM48Q8IWZ4 208 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 TMEM105Q8N8V8 129 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 AGR3Q8TD06 166 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ESAMQ96AP7 390 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 MOCOSQ96EN8 888 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 PTCD3Q96EY7 689 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 MENTQ9BUN1 341 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 NUF2Q9BZD4 464 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ADGRE2Q9UHX3 823 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 ZNF225Q9UK10 706 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 TSC22D4Q9Y3Q8 395 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 PCDHGA2Q9Y5H1 932 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 PCDHGA11Q9Y5H2 935 aa18.43■□□□□ 0.54
TSPAN4-204ENST00000397404 H0YIV9 168 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 SLC28A1O00337 649 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 OR4F21O95013 312 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 CAPN1P07384 714 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 HSD3B1P14060 373 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 HSD3B2P26439 372 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 AK4P27144 223 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 SERPINB1P30740 379 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 SIM2Q14190 667 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 PDCD2Q16342 344 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 HIST2H2ACQ16777 129 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 PLK5Q496M5 336 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 CCSMST1Q4G0I0 132 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 PRAMEF14Q5SWL7 426 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 PRAMEF13Q5VWM6 474 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 ATG9BQ674R7 924 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 HIST2H2AA3Q6FI13 130 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 GRHL2Q6ISB3 625 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 LETMD1Q6P1Q0 360 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 RPS27LQ71UM5 84 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 MAVSQ7Z434 540 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 THOC1Q96FV9 657 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 SHCBP1LQ9BZQ2 653 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 UCK1Q9HA47 277 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 SAR1AQ9NR31 198 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 TMEM45AQ9NWC5 275 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 ZFP69BQ9UJL9 534 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 PLEKHM1Q9Y4G2 1056 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 PCDHB11Q9Y5F2 797 aa18.42■□□□□ 0.54
TSPAN4-204ENST00000397404 NPIPB8E9PQR5 432 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 VIPP01282 170 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 NPPBP16860 134 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 TSPAN8P19075 237 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 GSTM2P28161 218 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 SERPINB3P29508 390 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 RXRGP48443 463 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 ARRB1P49407 418 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 IFT88Q13099 833 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 CHIT1Q13231 466 aa18.41■□□□□ 0.54
TSPAN4-204ENST00000397404 MAD2L1Q13257 205 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms