RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 LIMD1Q9UGP4 676 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 BRCA2P51587 3418 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 DFNA5O60443 496 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LEFTY1O75610 366 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 PIAS1O75925 651 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 GUCA1AP43080 201 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SLC9A5Q14940 896 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 LARS2Q15031 903 aaKnown RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 NAT16Q8N8M0 369 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 OR13C4Q8NGS5 318 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 RGMAQ96B86 450 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 SMPD3Q9NY59 655 aaPredicted RBP3.31□□□□□ -1.88
VPS13C-203ENST00000395896 B4GALT6Q9UBX8 382 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 FZD4Q9ULV1 537 aa3.31□□□□□ -1.88
VPS13C-203ENST00000395896 CXorf49A8MYA2 514 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RASGRP1O95267 797 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CLDN7O95471 211 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ADRB3P13945 408 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CREB1P16220 341 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IGFBP4P22692 258 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SOAT1P35610 550 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CLK1P49759 484 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ITGA1P56199 1179 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 C1QTNF8P60827 252 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CTBSQ01459 385 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ELOAQ14241 798 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KDELC1Q6UW63 502 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 LAYNQ6UX15 382 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DNAJB14Q8TBM8 379 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 EZH1Q92800 747 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AASDHPPTQ9NRN7 309 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CDV3Q9UKY7 258 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 NOTCH4Q99466 2003 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 HTR3EA5X5Y0 456 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 C5orf67F2Z3F1 127 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ALPIP09923 528 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PCNAP12004 261 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AMD1P17707 334 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 NRIP1P48552 1158 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IDH3AP50213 366 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DPTQ07507 201 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CCNYL2Q5T2Q4 361 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TRNP1Q6NT89 227 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RORBQ92753 470 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 YTHDF1Q9BYJ9 559 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CNOT11Q9UKZ1 510 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TDRKHQ9Y2W6 561 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BLACEA4D250 179 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 H3BNC9 293 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SPATA31D3P0C874 917 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ACRP10323 421 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PIM1P11309 404 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ANXA8P13928 327 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 FDXRP22570 491 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TEAD2Q15562 447 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SLC5A9Q2M3M2 681 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 GGTA1PQ4G0N0 100 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SPATA31D4Q6ZUB0 917 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 GAREM2Q75VX8 874 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ABHD13Q7L211 337 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TNKS2Q9H2K2 1166 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MARCH5Q9NX47 278 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KIR2DS5A0A0G2JLQ3 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 A0A0G2JNG1 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PRR23AA6NEV1 266 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KIR2DS3K7RE56 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RAP2AP10114 183 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CD1DP15813 335 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TEAD1P28347 426 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KIR2DS5Q14953 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PDCD4Q53EL6 469 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SLC30A9Q6PML9 568 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CASP12Q6UXS9 341 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF852Q6ZMS4 543 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SLC5A11Q8WWX8 675 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RCN3Q96D15 328 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IER2Q9BTL4 223 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IGFLR1Q9H665 355 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BPIFA1Q9NP55 256 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DOCK11Q5JSL3 2073 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 VGLL3A8MV65 326 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CR2P20023 1033 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 HLA-FP30511 346 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KCNJ2P63252 427 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PITX1P78337 314 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MEF2AQ02078 507 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PTCHD3Q3KNS1 767 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TCHHL1Q5QJ38 904 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KIAA1324Q6UXG2 1013 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MED13LQ71F56 2210 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TMC8Q8IU68 726 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 THRSPQ92748 146 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MRPL38Q96DV4 380 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PWWP2AQ96N64 755 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KCNH6Q9H252 994 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CLK4Q9HAZ1 481 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ECI2O75521 394 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BANF1O75531 89 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BCAS2O75934 225 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF682O95780 498 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms