RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TMEM8BA6NDV4 472 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 SLC16A5O15375 505 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 ABHD2P08910 425 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 IMPA1P29218 277 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 MLLT3P42568 568 aaPredicted RBP19.21■□□□□ 0.67
SNCA-203ENST00000394986 PNLIPRP1P54315 467 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 YBX1P67809 324 aaKnown RBP19.21■□□□□ 0.67
SNCA-203ENST00000394986 TUBB3Q13509 450 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 GPR19Q15760 415 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 SLC5A12Q1EHB4 618 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 SYTL1Q8IYJ3 562 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 CARFQ8N187 725 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 HMGCLL1Q8TB92 370 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 MCOLN3Q8TDD5 553 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 NAF1Q96HR8 494 aaKnown RBP19.21■□□□□ 0.67
SNCA-203ENST00000394986 MIPEPQ99797 713 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 UTP6Q9NYH9 597 aaKnown RBP19.21■□□□□ 0.67
SNCA-203ENST00000394986 BTRCQ9Y297 605 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 PCDHGA7Q9Y5G6 932 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 APC2O95996 2303 aa19.21■□□□□ 0.67
SNCA-203ENST00000394986 POLR1CO15160 346 aaPredicted RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 NVLO15381 856 aaKnown RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 INHBAP08476 426 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 CCDC166P0CW27 439 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 MAGP20916 626 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 OAS2P29728 719 aaKnown RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 TSNQ15631 228 aaKnown RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 SF1Q15637 639 aaKnown RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 ERCC6LQ2NKX8 1250 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 DCAF12Q5T6F0 453 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 SBSNQ6UWP8 590 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 RAPH1Q70E73 1250 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 ZFAND4Q86XD8 727 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 C19orf47Q8N9M1 422 aaKnown RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 FGF11Q92914 225 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 DDA1Q9BW61 102 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 FAM60AQ9NP50 221 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 FBXO8Q9NRD0 319 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 STOX2Q9P2F5 926 aaPredicted RBP19.2■□□□□ 0.66
SNCA-203ENST00000394986 ZMIZ1Q9ULJ6 1067 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 PCDHGA3Q9Y5H0 932 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 ADAMTS20P59510 1910 aa19.2■□□□□ 0.66
SNCA-203ENST00000394986 EXOC1LA0A1B0GW35 172 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 E7ENX8 843 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 GUCA1CO95843 209 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 SLC35E2BP0CK96 405 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 PCBP4P57723 403 aaKnown RBP19.19■□□□□ 0.66
SNCA-203ENST00000394986 RAB15P59190 212 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 TAP2Q03519 686 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 SLC29A2Q14542 456 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 ARHGAP19Q14CB8 494 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 PPP1R3AQ16821 1122 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 DEFB110Q30KQ9 67 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 TMEM164Q5U3C3 297 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 KIAA1614Q5VZ46 1190 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 CDHR3Q6ZTQ4 885 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 OR2A1Q8NGT9 310 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 SNIP1Q8TAD8 396 aaKnown RBP19.19■□□□□ 0.66
SNCA-203ENST00000394986 DCAKDQ8WVC6 231 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 SMPDL3AQ92484 453 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 SLC22A18Q96BI1 424 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 CCDC138Q96M89 665 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 DCBLD2Q96PD2 775 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 FGF21Q9NSA1 209 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 CELSR3Q9NYQ7 3312 aa19.19■□□□□ 0.66
SNCA-203ENST00000394986 MAP1BP46821 2468 aaKnown RBP19.18■□□□□ 0.66
SNCA-203ENST00000394986 HCRTR1O43613 425 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 NRP2O60462 931 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 GCAP28676 217 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 MSH2P43246 934 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 DLG1Q12959 904 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 CSHL1Q14406 222 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 TMTC4Q5T4D3 741 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 CEACAM20Q6UY09 585 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 LRRC56Q8IYG6 542 aaPredicted RBP19.18■□□□□ 0.66
SNCA-203ENST00000394986 UBLCP1Q8WVY7 318 aaPredicted RBP19.18■□□□□ 0.66
SNCA-203ENST00000394986 DERL2Q9GZP9 239 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 ATG10Q9H0Y0 220 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 PDE7BQ9NP56 450 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 SNX15Q9NRS6 342 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 ARL15Q9NXU5 204 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 CTNNAL1Q9UBT7 734 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 TAC3Q9UHF0 121 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 IKBKGQ9Y6K9 419 aa19.18■□□□□ 0.66
SNCA-203ENST00000394986 TIAF1O95411 115 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ALDOAP04075 364 aaKnown RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 HIST1H2AGP0C0S8 130 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 CD1DP15813 335 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ZNF28P17035 718 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 HIST1H2ADP20671 130 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 RPA3P35244 121 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 HSD17B2P37059 387 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 TBPL1P62380 186 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 IRF9Q00978 393 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ACY1Q03154 408 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 NAA30Q147X3 362 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 ST3GAL2Q16842 350 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ZXDCQ2QGD7 858 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 FCRL6Q6DN72 434 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms