RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 SPATA7Q9P0W8 599 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 KLHL42Q9P2K6 505 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 DHRS7Q9Y394 339 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 SMG1Q96Q15 3661 aaKnown RBP29.6■■■□□ 2.33
CMTM4-202ENST00000394106 PSIP1O75475 530 aaKnown RBP29.59■■■□□ 2.33
CMTM4-202ENST00000394106 CREG1O75629 220 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 CATP04040 527 aaKnown RBP29.59■■■□□ 2.33
CMTM4-202ENST00000394106 PSMB5P28074 263 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 RORAP35398 523 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 CCR10P46092 362 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 RPL21P46778 160 aaKnown RBP29.59■■■□□ 2.33
CMTM4-202ENST00000394106 RPS18P62269 152 aaKnown RBP29.59■■■□□ 2.33
CMTM4-202ENST00000394106 C2orf54Q08AI8 447 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 CRTC2Q53ET0 693 aaPredicted RBP29.59■■■□□ 2.33
CMTM4-202ENST00000394106 LCN10Q6JVE6 187 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 NEK10Q6ZWH5 1172 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 SPATA4Q8NEY3 305 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 OR9A1PQ8NGU1 263 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 CD200R1Q8TD46 325 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 WDR83Q9BRX9 315 aaKnown RBP29.59■■■□□ 2.33
CMTM4-202ENST00000394106 GPR87Q9BY21 358 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 PLAC1Q9HBJ0 212 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 SLC17A6Q9P2U8 582 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 PLCL2Q9UPR0 1127 aa29.59■■■□□ 2.33
CMTM4-202ENST00000394106 CDC14CA4D256 554 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 CTSBP07858 339 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 PTPN4P29074 926 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 POLE2P56282 527 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 PTCHD3Q3KNS1 767 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 ANKMY2Q8IV38 441 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 CPNE9Q8IYJ1 553 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 SYTL1Q8IYJ3 562 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 HMGCLL1Q8TB92 370 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 LRRC39Q96DD0 335 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 TEX264Q9Y6I9 313 aa29.58■■■□□ 2.33
CMTM4-202ENST00000394106 PRICKLE3O43900 615 aaPredicted RBP29.57■■■□□ 2.32
CMTM4-202ENST00000394106 HBQ1P09105 142 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 FURINP09958 794 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 FASTKQ14296 549 aaKnown RBP29.57■■■□□ 2.32
CMTM4-202ENST00000394106 CYP2A13Q16696 494 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 FIGLAQ6QHK4 219 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 ZNF517Q6ZMY9 492 aaPredicted RBP29.57■■■□□ 2.32
CMTM4-202ENST00000394106 CNTN4Q8IWV2 1026 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 MIPEPQ99797 713 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 TRMT6Q9UJA5 497 aaKnown RBP29.57■■■□□ 2.32
CMTM4-202ENST00000394106 FARSAQ9Y285 508 aaKnown RBP29.57■■■□□ 2.32
CMTM4-202ENST00000394106 AP1M2Q9Y6Q5 423 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 PIEZO2Q9H5I5 2752 aa29.57■■■□□ 2.32
CMTM4-202ENST00000394106 MYO1CO00159 1063 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 TP73O15350 636 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 MPC1LP0DKB6 136 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 ENO3P13929 434 aaPredicted RBP29.56■■■□□ 2.32
CMTM4-202ENST00000394106 MCM3P25205 808 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 GABRB3P28472 473 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 GRIA3P42263 894 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 PDIA2Q13087 525 aaKnown RBP29.56■■■□□ 2.32
CMTM4-202ENST00000394106 TSTA3Q13630 321 aaPredicted RBP29.56■■■□□ 2.32
CMTM4-202ENST00000394106 FCRL6Q6DN72 434 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 TRMT10BQ6PF06 316 aaKnown RBP29.56■■■□□ 2.32
CMTM4-202ENST00000394106 KIAA0408Q6ZU52 694 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 ZNF655Q8N720 491 aaPredicted RBP29.56■■■□□ 2.32
CMTM4-202ENST00000394106 PKP4Q99569 1192 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 DPH5Q9H2P9 285 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 EURLQ9NYK6 297 aa29.56■■■□□ 2.32
CMTM4-202ENST00000394106 FAM187AA6NFU0 413 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 H3BMH7 237 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 ZSCAN9O15535 394 aaPredicted RBP29.55■■■□□ 2.32
CMTM4-202ENST00000394106 KALRNO60229 2985 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 SYF2O95926 243 aaKnown RBP29.55■■■□□ 2.32
CMTM4-202ENST00000394106 AHSGP02765 367 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 ATXN8OSP0DMR3 200 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 CBSLP0DN79 551 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 CBSP35520 551 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 RBM20Q5T481 1227 aaKnown RBP29.55■■■□□ 2.32
CMTM4-202ENST00000394106 STEAP4Q687X5 459 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 UGT3A1Q6NUS8 523 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 PIWIL4Q7Z3Z4 852 aaKnown RBP29.55■■■□□ 2.32
CMTM4-202ENST00000394106 MCATQ8IVS2 390 aaKnown RBP29.55■■■□□ 2.32
CMTM4-202ENST00000394106 BBOF1Q8ND07 529 aa29.55■■■□□ 2.32
CMTM4-202ENST00000394106 A0A1W2PPV9 198 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 NDC80O14777 642 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 RAD51CO43502 376 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 FKBP9O95302 570 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 SFTPCP11686 197 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 TEDDM1Q5T9Z0 273 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 C1orf189Q5VU69 101 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 TLDC1Q6P9B6 456 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 MAATS1Q7Z4T9 603 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 ENDOVQ8N8Q3 282 aaKnown RBP29.54■■■□□ 2.32
CMTM4-202ENST00000394106 FBXO36Q8NEA4 188 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 OR2L3Q8NG85 312 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 APOBEC4Q8WW27 367 aaKnown RBP29.54■■■□□ 2.32
CMTM4-202ENST00000394106 ASB11Q8WXH4 323 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 ACAT2Q9BWD1 397 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 GEMIN8Q9NWZ8 242 aaKnown RBP29.54■■■□□ 2.32
CMTM4-202ENST00000394106 TAS2R13Q9NYV9 303 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 POLHQ9Y253 713 aa29.54■■■□□ 2.32
CMTM4-202ENST00000394106 ERGP11308 486 aa29.53■■■□□ 2.32
CMTM4-202ENST00000394106 AGXTP21549 392 aa29.53■■■□□ 2.32
CMTM4-202ENST00000394106 TIAL1Q01085 375 aaKnown RBP eCLIP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms