RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 JPH3Q8WXH2 748 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 SMPDL3AQ92484 453 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ISL2Q96A47 359 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ZUFSPQ96AP4 578 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 NXPE2Q96DL1 559 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 MRRFQ96E11 262 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 SLC41A2Q96JW4 573 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CABS1Q96KC9 395 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CCDC74BQ96LY2 380 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 SLC46A1Q96NT5 459 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FCRL4Q96PJ5 515 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TEFMQ96QE5 360 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 OR2A14Q96R47 310 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TAAR9Q96RI9 348 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 PKP4Q99569 1192 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 MAP3K3Q99759 626 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ZPBPQ9BS86 351 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 PITPNM3Q9BZ71 974 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ASPSCR1Q9BZE9 553 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ROPN1BQ9BZX4 212 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 PCBD2Q9H0N5 130 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 XKR8Q9H6D3 395 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CAB39LQ9H9S4 337 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ROPN1Q9HAT0 212 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 NMRAL1Q9HBL8 299 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FBXO8Q9NRD0 319 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 INTS7Q9NVH2 962 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ACTR10Q9NZ32 417 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TMEM9Q9P0T7 183 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CTNNAL1Q9UBT7 734 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 PDE10AQ9Y233 779 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 OARD1Q9Y530 152 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FREM2Q5SZK8 3169 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 WDFY3Q8IZQ1 3526 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ASPMQ8IZT6 3477 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 PTPRBP23467 1997 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 IGHV5-51A0A0C4DH38 117 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 A0A0J9YY10 115 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 HMX2A2RU54 273 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 TMEM8BA6NDV4 472 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SYCE1LA8MT33 242 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 A8MU76 341 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ISM1B1AKI9 464 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 E7ENX8 843 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 POLR1CO15160 346 aaPredicted RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 NVLO15381 856 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 PHGDHO43175 533 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 KIF1CO43896 1103 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 CDH16O75309 829 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 CCNDBP1O95273 360 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SLC16A8O95907 504 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SYF2O95926 243 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ALDOAP04075 364 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 MPOP05164 745 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ANXA5P08758 320 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 LTA4HP09960 611 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 NUDT17P0C025 328 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SLC35E2BP0CK96 405 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 FGF3P11487 239 aaPredicted RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 CD1DP15813 335 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 UGT2B7P16662 529 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SPINK2P20155 84 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 HRH2P25021 359 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 MPSTP25325 297 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 HSD17B3P37058 310 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 MAGEA12P43365 314 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 BDKRB1P46663 353 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 KPNA2P52292 529 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 GABREP78334 506 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ABATP80404 500 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 TAP2Q03519 686 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 RELAQ04206 551 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 PRDX1Q06830 199 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ZNF460Q14592 562 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 IL11RAQ14626 422 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 NAA30Q147X3 362 aaPredicted RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 C16orf72Q14CZ0 275 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ACAP2Q15057 778 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SF1Q15637 639 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 PPP1R3AQ16821 1122 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 CCSMST1Q4G0I0 132 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 C3orf38Q5JPI3 329 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SNAP47Q5SQN1 464 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 UBAP2Q5T6F2 1119 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 KLC3Q6P597 504 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SBSNQ6UWP8 590 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 FAM92BQ6ZTR7 304 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 GSPT2Q8IYD1 628 aaKnown RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 SYTL1Q8IYJ3 562 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 TCAIMQ8N3R3 496 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 RIBC1Q8N443 379 aaPredicted RBP6.53□□□□□ -1.36
UBBP1-201ENST00000392399 D2HGDHQ8N465 521 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 MREGQ8N565 214 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 RCBTB1Q8NDN9 531 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 OR2A1Q8NGT9 310 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 OR8K5Q8NH50 307 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 RHEBL1Q8TAI7 183 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 STAG3L4Q8TBR4 150 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 ACMSDQ8TDX5 336 aa6.53□□□□□ -1.36
UBBP1-201ENST00000392399 DENND1AQ8TEH3 1009 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms