RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RPN2P04844 631 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CEACAM5P06731 702 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 HOXC4P09017 264 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 G6PDP11413 515 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC2A4P14672 509 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 HNF4AP41235 474 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CASP2P42575 452 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 KCNK10P57789 538 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 UFM1P61960 85 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TBPL1P62380 186 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 RPL38P63173 70 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TDGQ13569 410 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CCDC85BQ15834 202 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 ZNF423Q2M1K9 1284 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 VPS26BQ4G0F5 336 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SGO1Q5FBB7 561 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 XKR6Q5GH73 641 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 GRHL2Q6ISB3 625 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CYP20A1Q6UW02 462 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 RETREG3Q86VR2 466 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TRIM69Q86WT6 500 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 DCUN1D3Q8IWE4 304 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 LRRC56Q8IYG6 542 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 PPFIBP2Q8ND30 876 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 DENND6BQ8NEG7 585 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 RAD51AP1Q96B01 352 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SPDL1Q96EA4 605 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TEX37Q96LM6 180 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 UHRF1Q96T88 793 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TIMM29Q9BSF4 260 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 APOOQ9BUR5 198 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SGPP1Q9BX95 441 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 C1orf109Q9NX04 203 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CIDEBQ9UHD4 219 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACSL5Q9ULC5 683 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 EIF3LQ9Y262 564 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 ASF1AQ9Y294 204 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 POLR3HQ9Y535 204 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 H0YIV9 168 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CACNB4O00305 520 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CFLARO15519 480 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 KCNJ13O60928 360 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SORBS2O94875 1100 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 FUCA1P04066 466 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 GABRG2P18507 467 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 GNAZP19086 355 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CD22P20273 847 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 JAK1P23458 1154 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TPMTP51580 245 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 GALNT13Q8IUC8 556 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 SYTL1Q8IYJ3 562 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 JADE3Q92613 823 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 TFGQ92734 400 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CCDC124Q96CT7 223 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 MAP10Q9P2G4 905 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 NKX1-2Q9UD57 310 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 CROTQ9UKG9 612 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 KCNE2Q9Y6J6 123 aa11.1□□□□□ -0.63
SMARCAL1-203ENST00000392128 E7ENX8 843 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 IFRD1O00458 451 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 MAN2B1O00754 1011 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC31A1O15431 190 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 SEC22BO75396 215 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 EEDO75530 441 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 KRT36O76013 467 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 PCSK2P16519 638 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 KELP23276 732 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 THOP1P52888 689 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 PNLIPRP1P54315 467 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 TAP2Q03519 686 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRKG2Q13237 762 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CEACAM7Q14002 265 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 DOC2AQ14183 400 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 KIAA0040Q15053 153 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR2T34Q8NGX1 318 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 OR5K2Q8NHB8 316 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 WDR20Q8TBZ3 569 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 MTFMTQ96DP5 389 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 SCARF2Q96GP6 870 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACTL8Q9H568 366 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 SPAG4Q9NPE6 437 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 FZD3Q9NPG1 666 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CD93Q9NPY3 652 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 L3MBTL1Q9Y468 752 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 PRR19A6NJB7 356 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 C9JVG2 144 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 SLC35G4P0C7Q5 338 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 ERGP11308 486 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 ACPPP15309 386 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 CD72P21854 359 aa11.09□□□□□ -0.63
SMARCAL1-203ENST00000392128 ME2P23368 584 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms