RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 C9orf43Q8TAL5 461 aaPredicted RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 TBC1D16Q8TBP0 767 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 HM13Q8TCT9 377 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 GPT2Q8TD30 523 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 ANKRD49Q8WVL7 239 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 FAR1Q8WVX9 515 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 CKAP2Q8WWK9 683 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SELENOMQ8WWX9 145 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 FIG4Q92562 907 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 ERGIC1Q969X5 290 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 FCRL5Q96RD9 977 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SECISBP2Q96T21 854 aaKnown RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 FAM110AQ9BQ89 295 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 TMEM47Q9BQJ4 181 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 CINPQ9BW66 212 aaPredicted RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 C1QTNF1Q9BXJ1 281 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SLC2A11Q9BYW1 496 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 GCOM2Q9BZD3 368 aaPredicted RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 GPR61Q9BZJ8 451 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SIRPDQ9H106 197 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 DPEP3Q9H4B8 488 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 EPB41L5Q9HCM4 733 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 TRPC7Q9HCX4 862 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 MRPL17Q9NRX2 175 aaKnown RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 PHPT1Q9NRX4 125 aaPredicted RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 PANK4Q9NVE7 773 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 RBM28Q9NW13 759 aaKnown RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 NMRK1Q9NWW6 199 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 CNOT2Q9NZN8 540 aaKnown RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 NDUFA13Q9P0J0 144 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 TRIM10Q9UDY6 481 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 NDRG3Q9UGV2 375 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 IPO11Q9UI26 975 aaKnown RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SLC24A2Q9UI40 661 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 PADI3Q9ULW8 664 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SNX7Q9UNH6 387 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 GPR132Q9UNW8 380 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 SLC8A2Q9UPR5 921 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 DHDHQ9UQ10 334 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 CARD8Q9Y2G2 431 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 WDR37Q9Y2I8 494 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 NFE2L3Q9Y4A8 694 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 RNF115Q9Y4L5 304 aa2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 HEMK1Q9Y5R4 338 aaPredicted RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 ZNF644Q9H582 1327 aaPredicted RBP2.07□□□□□ -2.08
SNORA40.19-201ENST00000390846 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MACROD2A1Z1Q3 448 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 DENND3A2RUS2 1198 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 GSAPA4D1B5 854 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 ANKUB1A6NFN9 424 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MFSD2BA6NFX1 497 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 DUXAA6NLW8 204 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 A6NNC1 897 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 FAM25EA8MYX2 175 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 J3KR12 359 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 J3QR06 171 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 DNALI1O14645 258 aaPredicted RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 CASQ2O14958 399 aaPredicted RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 XPO1O14980 1071 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 ANKRD28O15084 1053 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 CCNT1O60563 726 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 LRP3O75074 770 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 ATP2C2O75185 946 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MTX2O75431 263 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 ERLIN1O75477 346 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 HIST1H2ABP04908 130 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 SERPING1P05155 500 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 PCCBP05166 539 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 LIPFP07098 398 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 PLA2G4BP0C869 781 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 SMIM18P0DKX4 95 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 IRF1P10914 325 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 G6PDP11413 515 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 KRT5P13647 590 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 HIST1H2ADP20671 130 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 ACAT1P24752 427 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 HSPA1LP34931 641 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 PIGAP37287 484 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 PSMC4P43686 418 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 HNRNPFP52597 415 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 OAZ1P54368 228 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MRPS34P82930 218 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 GALK2Q01415 458 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 ROR2Q01974 943 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 TNFRSF17Q02223 184 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 CNTN2Q02246 1040 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 DSC1Q08554 894 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 SREBF2Q12772 1141 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 PNRC1Q12796 327 aaPredicted RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MSLNQ13421 630 aaPredicted RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 GALNT3Q14435 633 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MXD4Q14582 209 aaPredicted RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 MELKQ14680 651 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 KPNB1Q14974 876 aaKnown RBP2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 UGCGQ16739 394 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 CDO1Q16878 200 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 PNLIPRP3Q17RR3 467 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 KRT24Q2M2I5 525 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 TCTN1Q2MV58 587 aa2.06□□□□□ -2.08
SNORA40.19-201ENST00000390846 KRTAP27-1Q3LI81 207 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms