RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
CCDC57-202ENST00000389641 SLC30A2Q9BRI3 323 aa13.14□□□□□ -0.31
CCDC57-202ENST00000389641 AARSD1Q9BTE6 412 aaKnown RBP13.14□□□□□ -0.31
CCDC57-202ENST00000389641 SLC25A51Q9H1U9 297 aa13.14□□□□□ -0.31
CCDC57-202ENST00000389641 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
CCDC57-202ENST00000389641 MKLN1Q9UL63 735 aa13.14□□□□□ -0.31
CCDC57-202ENST00000389641 MED16Q9Y2X0 877 aa13.14□□□□□ -0.31
CCDC57-202ENST00000389641 RLFQ13129 1914 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 CXCR4P61073 352 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 KEAP1Q14145 624 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 SLC46A3Q7Z3Q1 461 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 TSPYL5Q86VY4 417 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 HORMAD1Q86X24 394 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 CCDC117Q8IWD4 279 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 OR4F6Q8NGB9 312 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 RNF170Q96K19 258 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 IQCF5A8MTL0 148 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 E2F3O00716 465 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 NIPSNAP2O75323 286 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PGRP06401 933 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 YES1P07947 543 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 VLDLRP98155 873 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 NFE2Q16621 373 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 GRAMD2AQ8IUY3 354 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 MTMR14Q8NCE2 650 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 KBTBD8Q8NFY9 601 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 OR4L1Q8NH43 312 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 ZFP42Q96MM3 310 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 ZBTB18Q99592 522 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 DPY30Q9C005 99 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 TM9SF3Q9HD45 589 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 RAD18Q9NS91 495 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PNMA8CA0A1B0GUJ8 204 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 H3BM21 787 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 OR1I1O60431 355 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 MMP2P08253 660 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 NPRL3Q12980 569 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PTPRNQ16849 979 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PROX2Q3B8N5 592 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 PARP15Q460N3 678 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 MARC1Q5VT66 337 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 BHLHA9Q7RTU4 235 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 GPSM1Q86YR5 675 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 LIX1Q8N485 282 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 GPR151Q8TDV0 419 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 IMP4Q96G21 291 aaKnown RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 SPATC1LQ9H0A9 340 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 SLA2Q9H6Q3 261 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 HEBP1Q9NRV9 189 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 MIOSQ9NXC5 875 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 TAS2R13Q9NYV9 303 aa13.13□□□□□ -0.31
CCDC57-202ENST00000389641 RABL2AQ9UBK7 228 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 ZNF490Q9ULM2 529 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-202ENST00000389641 MN1Q10571 1320 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-202ENST00000389641 FAM25AB3EWG3 89 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 FAM25CB3EWG5 89 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 FAM25GB3EWG6 89 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 TLR5O60602 858 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 GUCA1CO95843 209 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 EFNA1P20827 205 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-202ENST00000389641 PIK3CBP42338 1070 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 KIAA0040Q15053 153 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 MED22Q15528 200 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 CDONQ4KMG0 1287 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 GGHQ92820 318 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 PSMG2Q969U7 264 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 HMCESQ96FZ2 354 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 RERGLQ9H628 205 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SP110Q9HB58 689 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 ARNT2Q9HBZ2 717 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 C1orf109Q9NX04 203 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
CCDC57-202ENST00000389641 ARIH1Q9Y4X5 557 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-202ENST00000389641 IPPQ9Y573 584 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 TTC3P53804 2025 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 A0A0G2JMZ2 1700 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 LRRC37A2A6NM11 1700 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SEC22BO75396 215 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 ITGB1P05556 798 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SOX6P35712 828 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 HNF4AP41235 474 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 MAGEA11P43364 429 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 RGS6P49758 472 aa13.12□□□□□ -0.31
CCDC57-202ENST00000389641 SMARCB1Q12824 385 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms