RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ZNF300Q96RE9 604 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SH3GL1Q99961 368 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CCDC90BQ9GZT6 254 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TPK1Q9H3S4 243 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CCNB1IP1Q9NPC3 277 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SEMA4BQ9NPR2 832 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SACM1LQ9NTJ5 587 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PAK1IP1Q9NWT1 392 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ERVW-1Q9UQF0 538 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 FCF1Q9Y324 198 aaKnown RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 RWDD3Q9Y3V2 267 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ALPK3Q96L96 1907 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 MN1Q10571 1320 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PTGES3LE9PB15 166 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TAF4O00268 1085 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 KLK8O60259 260 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PRKD3O94806 890 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SLC4A1P02730 911 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 MSH3P20585 1137 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 DDX6P26196 483 aaKnown RBP eCLIP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CCR2P41597 374 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 STC1P52823 247 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TUBA1BP68363 451 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TIAL1Q01085 375 aaKnown RBP eCLIP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 UBE3AQ05086 875 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SEMA3AQ14563 771 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PGS1Q32NB8 556 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 C6orf136Q5SQH8 315 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SLX4IPQ5VYV7 408 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 LAIR2Q6ISS4 152 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TUBA1AQ71U36 451 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SLC22A16Q86VW1 577 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 OR56A4Q8NGH8 313 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SH3RF2Q8TEC5 729 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SLC47A1Q96FL8 570 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 AARSD1Q9BTE6 412 aaKnown RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 EHD1Q9H4M9 534 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 DUSP21Q9H596 190 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SMURF2Q9HAU4 748 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 HCFC1R1Q9NWW0 138 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ZNF229Q9UJW7 825 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TESMINQ9Y4I5 508 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 MAGED1Q9Y5V3 778 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 LRRC14BA6NHZ5 514 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TOR1BO14657 336 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 BCKDKO14874 412 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 RGS13O14921 159 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 GSTA4O15217 222 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 FZD6O60353 706 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 UPK1BO75841 260 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SCELO95171 688 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TRIM16O95361 564 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ANGPTL1O95841 491 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 RETP07949 1114 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PCNAP12004 261 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 AGXTP21549 392 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 NR4A1P22736 598 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 IL12AP29459 219 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CSNK1DP48730 415 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PHC1P78364 1004 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 RAD51Q06609 339 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 LMAN2Q12907 356 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CDK5R2Q13319 367 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PLEKHG6Q3KR16 790 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ATXN7L2Q5T6C5 722 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TPGS1Q6ZTW0 290 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 RALGPS2Q86X27 583 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CMTM8Q8IZV2 173 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 NDNFQ8TB73 568 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CHAC2Q8WUX2 184 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PPM1MQ96MI6 270 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ZNF583Q96ND8 569 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 DACH2Q96NX9 599 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SLIRPQ9GZT3 109 aaKnown RBP8.73□□□□□ -1.01
GPNMB-202ENST00000381990 DSN1Q9H410 356 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 PIF1Q9H611 641 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 ACTR8Q9H981 624 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 SCN3BQ9NY72 215 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TAS2R13Q9NYV9 303 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 USP22Q9UPT9 525 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 TIMM22Q9Y584 194 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 A3GALT2U3KPV4 340 aa8.73□□□□□ -1.01
GPNMB-202ENST00000381990 CXorf51AA0A1B0GTR3 108 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 CLDN24A6NM45 220 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 TTC34A8MYJ7 566 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 K7ERQ8 282 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ASNA1O43681 348 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 HS6ST1O60243 411 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 RFPL2O75678 378 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 PTTG1O95997 202 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 EN2P19622 333 aaPredicted RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SOX11P35716 441 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 EIF2DP41214 584 aaKnown RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MAPK8P45983 427 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MTPNP58546 118 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SLC35A2P78381 396 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 FADDQ13158 208 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 KEAP1Q14145 624 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms