RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CCDC189A1A4V9 331 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 PIPSLA2A3N6 862 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 TK2O00142 265 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 COPEO14579 308 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 KIF1CO43896 1103 aaKnown RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 PRICKLE3O43900 615 aaPredicted RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 ANXA5P08758 320 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 RBP1P09455 135 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 CDK4P11802 303 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 PRDX3P30048 256 aaKnown RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 CRHR1P34998 444 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 CCT5P48643 541 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 KPNA2P52292 529 aaKnown RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 PDX1P52945 283 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 PRKAA1Q13131 559 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 PUM1Q14671 1186 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMN1-202ENST00000380707 C18orf21Q32NC0 220 aaPredicted RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 FBXO48Q5FWF7 155 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 N4BP2L1Q5TBK1 243 aaPredicted RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 CDCP2Q5VXM1 449 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 ARMC6Q6NXE6 501 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 TMEM71Q6P5X7 295 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 FAM92BQ6ZTR7 304 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 PLXDC1Q8IUK5 500 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 BANPQ8N9N5 519 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 OR4D9Q8NGE8 314 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 WDR48Q8TAF3 677 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 FLVCR1-AS1Q8TAF5 88 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 PPM1MQ96MI6 270 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 OR2A14Q96R47 310 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 EGFL8Q99944 293 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 MRPL57Q9BQC6 102 aaKnown RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 MRPL46Q9H2W6 279 aaKnown RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 C12orf65Q9H3J6 166 aaKnown RBP12.24□□□□□ -0.45
SMN1-202ENST00000380707 SEMA6CQ9H3T2 930 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 TMBIM4Q9HC24 238 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 ACTR10Q9NZ32 417 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 KLHL3Q9UH77 587 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 EMCNQ9ULC0 261 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 IGHV5-10-1A0A0J9YXX1 117 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 GOLGA6L10A6NI86 522 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 ZNF839A8K0R7 811 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SYCE1LA8MT33 242 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 C2orf74A8MZ97 194 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 ISM1B1AKI9 464 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SUPT3HB4E1H0 165 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 TARM1B6A8C7 271 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 TAPBPO15533 448 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 GLRA3O75311 464 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SPAG7O75391 227 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SUPT3HO75486 399 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 C9P02748 559 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 UGT2B7P16662 529 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 PSMB5P28074 263 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 HNMTP50135 292 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 NAE1Q13564 534 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 TSTA3Q13630 321 aaPredicted RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 KIR2DS3Q14952 304 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 CLPPQ16740 277 aaPredicted RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 CDKL4Q5MAI5 379 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SNAP47Q5SQN1 464 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SPESP1Q6UW49 350 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 RBM44Q6ZP01 1051 aaKnown RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 B3GNT8Q7Z7M8 397 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SLITRK4Q8IW52 837 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 FAM20CQ8IXL6 584 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 PDPRQ8NCN5 879 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 ATL1Q8WXF7 558 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SMPDL3AQ92484 453 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 PYCR2Q96C36 320 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 MED8Q96G25 268 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 ZDHHC12Q96GR4 267 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 APOPT1Q96IL0 206 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SMC6Q96SB8 1091 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 ABCF3Q9NUQ8 709 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 INTS7Q9NVH2 962 aaKnown RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 NUDT4Q9NZJ9 180 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 SENP1Q9P0U3 644 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 PDP2Q9P2J9 529 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 PTBP2Q9UKA9 531 aaKnown RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 ENTPD2Q9Y5L3 495 aa12.23□□□□□ -0.45
SMN1-202ENST00000380707 COL27A1Q8IZC6 1860 aaPredicted RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 MN1Q10571 1320 aaPredicted RBP12.23□□□□□ -0.45
SMN1-202ENST00000380707 MATN2O00339 956 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 MT-CO3P00414 261 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 GGT5P36269 586 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 GDF5P43026 501 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ID4P47928 161 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 LSSP48449 732 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 TBPL1P62380 186 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 YBX1P67809 324 aaKnown RBP12.22□□□□□ -0.45
SMN1-202ENST00000380707 ZFP36L1Q07352 338 aaKnown RBP12.22□□□□□ -0.45
SMN1-202ENST00000380707 PFKFB4Q16877 469 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 PTCHD3Q3KNS1 767 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 HES3Q5TGS1 186 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 SULT1C3Q6IMI6 304 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms