RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ERN1O75460 977 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 PSIP1O75475 530 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 SMIM18P0DKX4 95 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 JUPP14923 745 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 HALP42357 657 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 PRLHRP49683 370 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 MTPNP58546 118 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 ADRM1Q16186 407 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 SPANXN4Q5MJ08 99 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 FRG2Q64ET8 278 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 KRT80Q6KB66 452 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 NEK5Q6P3R8 708 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 IYDQ6PHW0 289 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 SUSD1Q6UWL2 747 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 RASGRP3Q8IV61 690 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 POP5Q969H6 163 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 PYCR2Q96C36 320 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 CCDC115Q96NT0 180 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 FRG2BQ96QU4 278 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 PRPF18Q99633 342 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 BDH2Q9BUT1 245 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 THUMPD3Q9BV44 507 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 EPHX3Q9H6B9 360 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 RPF2Q9H7B2 306 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 SH3GLB1Q9Y371 365 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 KIAA0100Q14667 2235 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 A0A0J9YVX5 310 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 KPNA3O00505 521 aaPredicted RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 PER2O15055 1255 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 TPST1O60507 370 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 NFATC1O95644 943 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 LDLRP01130 860 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 ANXA6P08133 673 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 CDH1P12830 882 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 GGT1P19440 569 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 OR4D2P58180 307 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 CHIT1Q13231 466 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 ATP6AP1Q15904 470 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 ZXDCQ2QGD7 858 aaPredicted RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 ZNF554Q86TJ5 538 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 RALGPS2Q86X27 583 aaPredicted RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 OR2T12Q8NG77 320 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 CSGALNACT1Q8TDX6 532 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 SMG7Q92540 1137 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 ZCCHC2Q9C0B9 1178 aaKnown RBP12.28□□□□□ -0.44
VPS16-202ENST00000380445 VAPAQ9P0L0 249 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 AK5Q9Y6K8 562 aa12.28□□□□□ -0.44
VPS16-202ENST00000380445 SAC3D1A6NKF1 404 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 SOCS2O14508 198 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 GSTA4O15217 222 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PGM3O95394 542 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 ITPKAP23677 461 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 HRH2P25021 359 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 S100A3P33764 101 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PFN3P60673 137 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 IRF8Q02556 426 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PLOD1Q02809 727 aaPredicted RBP12.27□□□□□ -0.44
VPS16-202ENST00000380445 CYP4F3Q08477 520 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 GK3PQ14409 553 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 NHSL2Q5HYW2 709 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PARS2Q7L3T8 475 aaKnown RBP12.27□□□□□ -0.44
VPS16-202ENST00000380445 CYP2U1Q7Z449 544 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 CARM1Q86X55 608 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 CBR4Q8N4T8 237 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 BEND7Q8N7W2 519 aaPredicted RBP12.27□□□□□ -0.44
VPS16-202ENST00000380445 ITFG1Q8TB96 612 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 OR8D1Q8WZ84 308 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 MPP4Q96JB8 637 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 ANKRD60Q9BZ19 345 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 ATG10Q9H0Y0 220 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 MTG2Q9H4K7 406 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PIF1Q9H611 641 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 GORASP2Q9H8Y8 452 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PCDHGB4Q9UN71 923 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 PCDHGB5Q9Y5G0 923 aa12.27□□□□□ -0.44
VPS16-202ENST00000380445 TSPAN6O43657 245 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 CCR3P51677 355 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 ABRQ12979 859 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
VPS16-202ENST00000380445 AAK1Q2M2I8 961 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS16-202ENST00000380445 FAM98BQ52LJ0 330 aaKnown RBP12.27□□□□□ -0.45
VPS16-202ENST00000380445 CCDC92Q53HC0 331 aaPredicted RBP12.27□□□□□ -0.45
VPS16-202ENST00000380445 NCCRP1Q6ZVX7 275 aaPredicted RBP12.27□□□□□ -0.45
VPS16-202ENST00000380445 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 TMIEQ8NEW7 156 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 BPIFB1Q8TDL5 484 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 SNRNP27Q8WVK2 155 aaKnown RBP12.27□□□□□ -0.45
VPS16-202ENST00000380445 TESCQ96BS2 214 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 ZNF583Q96ND8 569 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 UGT2B28Q9BY64 529 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 KCNH6Q9H252 994 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 PNPLA3Q9NST1 481 aa12.27□□□□□ -0.45
VPS16-202ENST00000380445 EDDM13A0A1B0GTR0 161 aa12.26□□□□□ -0.45
VPS16-202ENST00000380445 SLC5A10A0PJK1 596 aa12.26□□□□□ -0.45
VPS16-202ENST00000380445 DFNA5O60443 496 aa12.26□□□□□ -0.45
VPS16-202ENST00000380445 RASAL1O95294 804 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms