RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ANHXE9PGG2 379 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 UGDHO60701 494 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 RASAL1O95294 804 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 LDLRP01130 860 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 TFAP2AP05549 437 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PGRP06401 933 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 TIMP2P16035 220 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 XPAP23025 273 aaPredicted RBP20.97■□□□□ 0.95
TRIM54-202ENST00000380075 OR4D2P58180 307 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 GK3PQ14409 553 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 CPSF6Q16630 551 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRIM54-202ENST00000380075 ZNF284Q2VY69 593 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 CNPY1Q3B7I2 92 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 FAM174BQ3ZCQ3 159 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 ZNF805Q5CZA5 627 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 SGO1Q5FBB7 561 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 LRRC73Q5JTD7 316 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 LDLRAP1Q5SW96 308 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 IYDQ6PHW0 289 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 DPPA4Q7L190 304 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 FAM110BQ8TC76 370 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 POP5Q969H6 163 aaKnown RBP20.97■□□□□ 0.95
TRIM54-202ENST00000380075 FBXL8Q96CD0 374 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 CMTM7Q96FZ5 175 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 VPS35Q96QK1 796 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PRPF18Q99633 342 aaKnown RBP20.97■□□□□ 0.95
TRIM54-202ENST00000380075 ACPTQ9BZG2 426 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PLA2G2FQ9BZM2 168 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 DNAJC11Q9NVH1 559 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PCDHGB4Q9UN71 923 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 PCDHGB5Q9Y5G0 923 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 AK5Q9Y6K8 562 aa20.97■□□□□ 0.95
TRIM54-202ENST00000380075 SLCO2B1O94956 709 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ANXA6P08133 673 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 GGT1P19440 569 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 MAPK9P45984 424 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 POLE2P56282 527 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 HTR4Q13639 388 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 PTCHD3Q3KNS1 767 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ARSIQ5FYB1 569 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 RAVER1Q8IY67 606 aaKnown RBP20.96■□□□□ 0.95
TRIM54-202ENST00000380075 CELF5Q8N6W0 485 aaKnown RBP20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ELMO1Q92556 727 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 GORASP2Q9H8Y8 452 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 KCNK12Q9HB15 430 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 PAPOLBQ9NRJ5 636 aaKnown RBP20.96■□□□□ 0.95
TRIM54-202ENST00000380075 NEUROG3Q9Y4Z2 214 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 WNT6Q9Y6F9 365 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 RNF103-CHMP3A0A140T963 221 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ARHGAP10A1A4S6 786 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 HEPACAM2A8MVW5 462 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 TPST1O60507 370 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 PGM3O95394 542 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 PDYNP01213 254 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ASGR2P07307 311 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 BCKDHAP12694 445 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 CLDN8P56748 225 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 MTPNP58546 118 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 RPS14P62263 151 aaKnown RBP20.96■□□□□ 0.95
TRIM54-202ENST00000380075 SLC30A9Q6PML9 568 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 MTSS1LQ765P7 747 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 VRK3Q8IV63 474 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 GALNT15Q8N3T1 639 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 OR52E4Q8NGH9 312 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ZFAND2BQ8WV99 257 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 BDH2Q9BUT1 245 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 ZNHIT2Q9UHR6 403 aa20.96■□□□□ 0.95
TRIM54-202ENST00000380075 C19orf67A6NJJ6 358 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 TTC34A8MYJ7 566 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 ERN1O75460 977 aaKnown RBP20.95■□□□□ 0.94
TRIM54-202ENST00000380075 H6PDO95479 791 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 GSTM1P09488 218 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 NR1H2P55055 460 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 PLOD1Q02809 727 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-202ENST00000380075 GSTM4Q03013 218 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 TJAP1Q5JTD0 557 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 SPANXN4Q5MJ08 99 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 SUSD1Q6UWL2 747 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 VITQ6UXI7 678 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 Q6ZVL8 140 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 FKBP9P1Q75LS8 142 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 SATL1Q86VE3 508 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 RALGPS2Q86X27 583 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-202ENST00000380075 DTWD1Q8N5C7 304 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 BPIFB1Q8TDL5 484 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 BTN2A2Q8WVV5 523 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 SCAMP4Q969E2 229 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 ELSPBP1Q96BH3 223 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 DGCR14Q96DF8 476 aaKnown RBP20.95■□□□□ 0.94
TRIM54-202ENST00000380075 ZNF583Q96ND8 569 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 NECAB3Q96P71 396 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-202ENST00000380075 CD320Q9NPF0 282 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 VAPAQ9P0L0 249 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 OAZ3Q9UMX2 235 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 MYRFQ9Y2G1 1151 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 COMMD3-BMI1R4GMX3 469 aa20.95■□□□□ 0.94
TRIM54-202ENST00000380075 MUC3AQ02505 3323 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ACOX3O15254 700 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 SGTAO43765 313 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 HOXB6P17509 224 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms