RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 G3BP2Q9UN86 482 aaKnown RBP23.73■■□□□ 1.39
TNFRSF4-201ENST00000379236 HCRTR1O43613 425 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 DNAJB5O75953 348 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 USP1O94782 785 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 CBSLP0DN79 551 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 CBSP35520 551 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 CSRP3P50461 194 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 DCDP81605 110 aaKnown RBP23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 CHAF1BQ13112 559 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 LONRF1Q17RB8 773 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 ASB18Q6ZVZ8 466 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 CENPUQ71F23 418 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 LMNTD2Q8IXW0 634 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 NAT8LQ8N9F0 302 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 TEX19Q8NA77 164 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 GABPB2Q8TAK5 448 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 DENND1AQ8TEH3 1009 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 FAM114A2Q9NRY5 505 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 DHCR7Q9UBM7 475 aaKnown RBP23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 NEU2Q9Y3R4 380 aa23.72■■□□□ 1.39
TNFRSF4-201ENST00000379236 ZNF185O15231 689 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 TCP1P17987 556 aaKnown RBP23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 NR1D1P20393 614 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 CASRP41180 1078 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 PTGIRP43119 386 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 CCL11P51671 97 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 CCSMST1Q4G0I0 132 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 CPZQ66K79 652 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 FIGLAQ6QHK4 219 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 MCATQ8IVS2 390 aaKnown RBP23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 SLC25A23Q9BV35 468 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 TRIM55Q9BYV6 548 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 ING2Q9H160 280 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 KCNF1Q9H3M0 494 aa23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 FBXO6Q9NRD1 293 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF4-201ENST00000379236 CATP04040 527 aaKnown RBP23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 CAPN1P07384 714 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 ALAS2P22557 587 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 OTX2P32243 289 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 FOLR3P41439 243 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 ARSFP54793 590 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 CTBP1Q13363 440 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 KLHL38Q2WGJ6 581 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 FAM69BQ5VUD6 431 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 ZNF385CQ66K41 422 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 PCGF5Q86SE9 256 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 DENND6AQ8IWF6 608 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 TTC29Q8NA56 475 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 GBP5Q96PP8 586 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 MIPEPQ99797 713 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 EPN3Q9H201 632 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 FAM169AQ9Y6X4 670 aa23.7■■□□□ 1.38
TNFRSF4-201ENST00000379236 MATN4O95460 622 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 GRIA3P42263 894 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 PGDP52209 483 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 RRADP55042 308 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 TSTA3Q13630 321 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 SLC9A5Q14940 896 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 NAA25Q14CX7 972 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 ACSBG2Q5FVE4 666 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 TCTE1Q5JU00 501 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 ADAMTS17Q8TE56 1095 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 ZUFSPQ96AP4 578 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 SELENOSQ9BQE4 189 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 FAM167BQ9BTA0 163 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 DDX47Q9H0S4 455 aaKnown RBP23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 PTRH2Q9Y3E5 179 aaKnown RBP23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 MED13Q9UHV7 2174 aa23.69■■□□□ 1.38
TNFRSF4-201ENST00000379236 ZCWPW2A0A1B0GU75 182 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 TARM1B6A8C7 271 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 H3BMH7 237 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 CTSBP07858 339 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 PIM1P11309 404 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 PSMB5P28074 263 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 CMPK1P30085 196 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 SLC1A2P43004 574 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 MAGEA3P43357 314 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 GBX1Q14549 363 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 RNASEH2BQ5TBB1 312 aaKnown RBP23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 FCRL6Q6DN72 434 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 TTLL10Q6ZVT0 673 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 MED25Q71SY5 747 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 OR9A1PQ8NGU1 263 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 HMGCLL1Q8TB92 370 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 IP6K3Q96PC2 410 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 GALPQ9UBC7 116 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 COMMD10Q9Y6G5 202 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 NUP210LQ5VU65 1888 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 ANKRD12Q6UB98 2062 aa23.68■■□□□ 1.38
TNFRSF4-201ENST00000379236 KRT87PA6NCN2 255 aa23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 ZNF839A8K0R7 811 aa23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 DNALI1O14645 258 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 PGAM1P18669 254 aa23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 RPA3P35244 121 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 GRM7Q14831 915 aa23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 NKAIN1Q4KMZ8 207 aa23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 KCNMB4Q86W47 210 aa23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 TMEM102Q8N9M5 508 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF4-201ENST00000379236 OR2L3Q8NG85 312 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms