RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 RSPRY1Q96DX4 576 aa8.58□□□□□ -1.04
LIG3-202ENST00000378526 SPATA33Q96N06 139 aa8.58□□□□□ -1.04
LIG3-202ENST00000378526 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
LIG3-202ENST00000378526 LRRC19Q9H756 370 aa8.58□□□□□ -1.04
LIG3-202ENST00000378526 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
LIG3-202ENST00000378526 RPS10-NUDT3A0A1W2PQS6 291 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 MYMKA6NI61 221 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 H0YAE9 185 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 K7EPI3 171 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 LRRTM2O43300 516 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 PROM1O43490 865 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TRBC1P01850 177 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CSTBP04080 98 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 LINC00032P0C843 101 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 HTR7P34969 479 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 RPS10P46783 165 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 TAS2R20P59543 309 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 NOTUMQ6P988 496 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 DET1Q7L5Y6 550 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 RSC1A1Q92681 617 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TMEM80Q96HE8 168 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ZNF75AQ96N20 296 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 OSGEPL1Q9H4B0 414 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ATP13A1Q9HD20 1204 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 MEPEQ9NQ76 525 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 RAPGEF6Q8TEU7 1601 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ARHGEF11O15085 1522 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 KIAA1324LA8MWY0 1029 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 MYL3P08590 195 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CALCRP30988 508 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TPMTP51580 245 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TKTL1P51854 596 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 C2orf80Q0P641 193 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ANKRD22Q5VYY1 191 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ZNF598Q86UK7 904 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 PYROXD2Q8N2H3 581 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 PLPP5Q8NEB5 264 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CROCC2H7BZ55 1655 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 RBAK-RBAKDNI3L0D1 243 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 FKTNO75072 461 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 HTR3BO95264 441 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 BDKRB2P30411 391 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 FMO3P31513 532 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CCR1P32246 355 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ACTBP60709 375 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ACTG1P63261 375 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 GAREM2Q75VX8 874 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 PTGR2Q8N8N7 351 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 TNFRSF10DQ9UBN6 386 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 A0A0A0MRY4 1105 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 A0A1B0GVM2 712 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TCAF2A6NFQ2 919 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 INHAP05111 366 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 MYBP10242 640 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 HOXC12P31275 282 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ETV3P41162 512 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CDNFQ49AH0 187 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 GTF2H4Q92759 462 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SPATA13Q96N96 652 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 OR52A5Q9H2C5 316 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 MEAF6Q9HAF1 191 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TPT1P8Q9HAU6 139 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TBX20Q9UMR3 447 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CDK13Q14004 1512 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 FGF10O15520 208 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 PTBP3O95758 552 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 ADORA1P30542 326 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 RFC3P40938 356 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SULT2A1Q06520 285 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 XKR6Q5GH73 641 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CHSY3Q70JA7 882 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SNX29P2Q8IUI4 249 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 OXER1Q8TDS5 423 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 LRRC3Q9BY71 257 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SLC19A3Q9BZV2 496 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 OSGEPQ9NPF4 335 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CAPN14A8MX76 684 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 RFXAPO00287 272 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ICMTO60725 284 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 GADD45GO95257 159 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TFP02787 698 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ETV6P41212 452 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SLC9A9Q8IVB4 645 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 MCEMP1Q8IX19 187 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 HJURPQ8NCD3 748 aaPredicted RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 RLIMQ9NVW2 624 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 SH3BGRL2Q9UJC5 107 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 CPSF4LA6NMK7 179 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 EIF2DP41214 584 aaKnown RBP8.57□□□□□ -1.04
LIG3-202ENST00000378526 CDH8P55286 799 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TMEM69Q5SWH9 247 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 GPR157Q5UAW9 335 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 ZNF676Q8N7Q3 588 aa8.57□□□□□ -1.04
LIG3-202ENST00000378526 TMEM185AQ8NFB2 350 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms