RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
NPHP4-203ENST00000378169 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
NPHP4-203ENST00000378169 PIANPQ8IYJ0 282 aa12.89□□□□□ -0.35
NPHP4-203ENST00000378169 KAT2AQ92830 837 aa12.89□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF514Q96K75 400 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-203ENST00000378169 SEMA3GQ9NS98 782 aa12.89□□□□□ -0.35
NPHP4-203ENST00000378169 TAC3Q9UHF0 121 aa12.89□□□□□ -0.35
NPHP4-203ENST00000378169 TGM5O43548 720 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 NADKO95544 446 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ENGP17813 658 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 BMP7P18075 431 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 EEFSECP57772 596 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 MRPL28Q13084 256 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 GRM2Q14416 872 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 LAPTM4AQ15012 233 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF534Q76KX8 674 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 FAM20CQ8IXL6 584 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 SLC34A3Q8N130 599 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 AMER2Q8N7J2 671 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 MYDGFQ969H8 173 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 CD244Q9BZW8 370 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 CARS2Q9HA77 564 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ABCB10Q9NRK6 738 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 KCNK6Q9Y257 313 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 SOCS5O75159 536 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TRMUO75648 421 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 SORBS2O94875 1100 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 H6PDO95479 791 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 KLK1P06870 262 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TAS2R41P59536 307 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 RPL26P61254 145 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TMEM115Q12893 351 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ATP13A5Q4VNC0 1218 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ASRGL1Q7L266 308 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 BEND5Q7L4P6 421 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TRPV3Q8NET8 790 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 PEX13Q92968 403 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 MAT2BQ9NZL9 334 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 PTPRZ1P23471 2315 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 A0A1W2PRB8 838 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 UGT2B17O75795 530 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 PAK4O96013 591 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 SLC6A4P31645 630 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 RYKP34925 604 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 DGKEP52429 567 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 SMIM11AP58511 58 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TAF8Q7Z7C8 310 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 PHC3Q8NDX5 983 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 RHEBL1Q8TAI7 183 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 CCM2Q9BSQ5 444 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ZCCHC3Q9NUD5 404 aaKnown RBP12.88□□□□□ -0.35
NPHP4-203ENST00000378169 ACTR3BQ9P1U1 418 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 PLAGL1Q9UM63 463 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
NPHP4-203ENST00000378169 TSPAN6O43657 245 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 OAS1P00973 400 aaKnown RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF8P17098 575 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ALDH4A1P30038 563 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 TALDO1P37837 337 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 CAPGP40121 348 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 RGRP47804 291 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 C18orf21Q32NC0 220 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 SLC39A5Q6ZMH5 540 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ARHGAP22Q7Z5H3 698 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 LINC01465Q8N7H1 131 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PIH1D2Q8WWB5 315 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 FANCEQ9HB96 536 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ITM2CQ9NQX7 267 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PPP6CO00743 305 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ZNF30P17039 623 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 MAGP20916 626 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 KCNA5P22460 613 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PRKACGP22612 351 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 VIPR2P41587 438 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 DEFB103AP81534 67 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PRAMEF14Q5SWL7 426 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PRAMEF13Q5VWM6 474 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PSMA8Q8TAA3 256 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 PTERQ96BW5 349 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 EFCAB11Q9BUY7 163 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 ELOVL2Q9NXB9 296 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 IFT80Q9P2H3 777 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 EMCNQ9ULC0 261 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 LRRC42Q9Y546 428 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 SHANK3Q9BYB0 1731 aa12.87□□□□□ -0.35
NPHP4-203ENST00000378169 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 CHRM5P08912 532 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-203ENST00000378169 EBLN1P0CF75 366 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms