RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SIM2Q14190 667 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 PCBP2Q15366 365 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF181Q2M3W8 571 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 RFX4Q33E94 735 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 SBSNQ6UWP8 590 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 MILR1Q7Z6M3 343 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 ANKK1Q8NFD2 765 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 TBCDQ9BTW9 1192 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 NEK6Q9HC98 313 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 DHRS7Q9Y394 339 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 ANKRD34BA5PLL1 514 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 FFAR2O15552 330 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 CLDN11O75508 207 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 MT-ND2P03891 347 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 MAGP20916 626 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 MASP1P48740 699 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 RPL38P63173 70 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 FAM189BP81408 668 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 IL1RL1Q01638 556 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 COLEC12Q5KU26 742 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 RTP2Q5QGT7 225 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 CCSAPQ6IQ19 270 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF540Q8NDQ6 660 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 SETD9Q8NE22 299 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 RHBDF1Q96CC6 855 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 EID2BQ96D98 161 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 CAPNS2Q96L46 248 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 CEP295NLQ96MC4 621 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 YME1L1Q96TA2 773 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 CEP44Q9C0F1 390 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 EFCAB9A8MZ26 197 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 FFAR3O14843 346 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 RAD51BO15315 384 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 GPR42O15529 346 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 CD36P16671 472 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 ENDOUP21128 410 aaKnown RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 GGT5P36269 586 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 GDF5P43026 501 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 GATMP50440 423 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 COPZ1P61923 177 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 VAC14Q08AM6 782 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 ZNF548Q8NEK5 533 aaPredicted RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 CIPCQ9C0C6 399 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 P2RY12Q9H244 342 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 KAT8Q9H7Z6 458 aaKnown RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 PRELID1Q9Y255 219 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 PCDHB9Q9Y5E1 797 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 TNPO3Q9Y5L0 923 aaKnown RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 ELOVL7A1L3X0 281 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 SAGE2PA6NJ88 616 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 CXCR6O00574 342 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 CYP4B1P13584 511 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 SPNP16150 400 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 JUNDP17535 347 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 CTPS1P17812 591 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 ARF5P84085 180 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 NOGQ13253 232 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 KIAA0040Q15053 153 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 PLEKHG6Q3KR16 790 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 ZC3H12BQ5HYM0 836 aaKnown RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 LRRC8DQ7L1W4 858 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 DET1Q7L5Y6 550 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 HIPK1Q86Z02 1210 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 IKZF5Q9H5V7 419 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 ANKHQ9HCJ1 492 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 FARSBQ9NSD9 589 aaKnown RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 RABL2AQ9UBK7 228 aaPredicted RBP16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 UGT2A1Q9Y4X1 527 aa16.2■□□□□ 0.18
PCDHA1-201ENST00000378133 RGS13O14921 159 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CD160O95971 181 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 MSH3P20585 1137 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CASP3P42574 277 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CYP4F3Q08477 520 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 TRAF3Q13114 568 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 FAM174BQ3ZCQ3 159 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 ZNF404Q494X3 552 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 FAAH2Q6GMR7 532 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CCDC103Q8IW40 242 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 NCLNQ969V3 563 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 RHNO1Q9BSD3 238 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 MIR1-1HGQ9H1L0 117 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 DCSTAMPQ9H295 470 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 RIBC2Q9H4K1 309 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 ACOT13Q9NPJ3 140 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 ELOVL2Q9NXB9 296 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 PKP3Q9Y446 797 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CCL27Q9Y4X3 112 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 H7C0S8 307 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 IFRD1O00458 451 aaPredicted RBP16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 TAPBPO15533 448 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 RGS10O43665 173 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 OTCP00480 354 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 IRF1P10914 325 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 ITGAMP11215 1152 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 IGFBP5P24593 272 aa16.19■□□□□ 0.18
PCDHA1-201ENST00000378133 CORO1AP31146 461 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms