RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RSPH9Q9H1X1 276 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 Q9H521 79 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 CXorf56Q9H5V9 222 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 STARD5Q9NSY2 213 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 DNAJC11Q9NVH1 559 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ZDHHC3Q9NYG2 299 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 WDR81Q562E7 1941 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 K7EPI3 171 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 PRKNO60260 465 aaPredicted RBP7.9□□□□□ -1.15
CKAP2-203ENST00000378037 SNNO75324 88 aaPredicted RBP7.9□□□□□ -1.15
CKAP2-203ENST00000378037 PRKRAO75569 313 aaKnown RBP7.9□□□□□ -1.15
CKAP2-203ENST00000378037 TGDSO95455 350 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 PDYNP01213 254 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 CDH1P12830 882 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 ALAS2P22557 587 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 SSR2P43308 183 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 SEPHS1P49903 392 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 RUNX3Q13761 415 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 LIPIQ6XZB0 460 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 AMZ2Q86W34 360 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 OR2T12Q8NG77 320 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 FIBINQ8TAL6 211 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 SCRN2Q96FV2 425 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 COQ10BQ9H8M1 238 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 TRIM39Q9HCM9 518 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 S100A14Q9HCY8 104 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 PDE10AQ9Y233 779 aa7.9□□□□□ -1.15
CKAP2-203ENST00000378037 MAGEB17A8MXT2 336 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FOXD2O60548 495 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FTH1P02794 183 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 OGNP20774 298 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ACRV1P26436 265 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 CCT8P50990 548 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FOLH1Q04609 750 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 SAMD4BQ5PRF9 694 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 Q7L0L9 218 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TAF8Q7Z7C8 310 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 DSG4Q86SJ6 1040 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PQLC1Q8N2U9 271 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TMEM132CQ8N3T6 1108 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FAM46DQ8NEK8 389 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 BPIFB6Q8NFQ5 453 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PTCD2Q8WV60 388 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TP53INP1Q96A56 240 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 RSPRY1Q96DX4 576 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 APIPQ96GX9 242 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PPP1R16AQ96I34 528 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 MYCBPQ99417 103 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 C17orf62Q9BQA9 187 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TRIM4Q9C037 500 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 WDR26Q9H7D7 661 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 DNAJC28Q9NX36 388 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 SOHLH2Q9NX45 425 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 STX18Q9P2W9 335 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 SERGEFQ9UGK8 458 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ASB3Q9Y575 518 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ORC6Q9Y5N6 252 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 AP4B1Q9Y6B7 739 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 CEP295Q9C0D2 2601 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 LTBP2Q14767 1821 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PPM1DO15297 605 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 EFCAB14O75071 495 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ALBP02768 609 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 MYF5P13349 255 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 AMD1P17707 334 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FDXRP22570 491 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 GJA4P35212 333 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FEN1P39748 380 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ARL4DP49703 201 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 CCR4P51679 360 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ADARP55265 1226 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PHEXP78562 749 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FAAH2Q6GMR7 532 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 CERS6Q6ZMG9 384 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 USP53Q70EK8 1073 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 MMP21Q8N119 569 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ZNF276Q8N554 614 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 NRG4Q8WWG1 115 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PTCD3Q96EY7 689 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 FAR2Q96K12 515 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 BIRC8Q96P09 236 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 HHIPQ96QV1 700 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 LGR4Q9BXB1 951 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 ASPSCR1Q9BZE9 553 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 EHD1Q9H4M9 534 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 MARCH7Q9H992 704 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 RDH14Q9HBH5 336 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 LTB4R2Q9NPC1 389 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 PRDM8Q9NQV8 689 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 OAZ3Q9UMX2 235 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 TBC1D30Q9Y2I9 924 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 DPPA5A6NC42 116 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 BHMG1C9JSJ3 638 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 CLOCKO15516 846 aa7.89□□□□□ -1.15
CKAP2-203ENST00000378037 NOL3O60936 208 aaKnown RBP7.89□□□□□ -1.15
CKAP2-203ENST00000378037 H2AFYO75367 372 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms