RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	TUBGCP3	Q96CW5	907 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	HBEGF	Q99075	208 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	KCNK12	Q9HB15	430 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	RSL24D1	Q9UHA3	163 aa	Known RBP	11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TMCC3	Q9ULS5	477 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	PCDHGA11	Q9Y5H2	935 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	SCAMP1	O15126	338 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	KMO	O15229	486 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ATG13	O75143	517 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ESRRB	O95718	433 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	EGF	P01133	1207 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	SERPINA6	P08185	405 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	NTSR1	P30989	418 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	LSM12	Q3MHD2	195 aa	Known RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	RIPOR1	Q6ZS17	1223 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	MAVS	Q7Z434	540 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	LSMEM1	Q8N8F7	131 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	KIAA1958	Q8N8K9	716 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	EME1	Q96AY2	570 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	CCDC138	Q96M89	665 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	LENG8	Q96PV6	779 aa	Predicted RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	NOL11	Q9H8H0	719 aa	Known RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	DNAJC28	Q9NX36	388 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	THEG	Q9P2T0	379 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	MBD1	Q9UIS9	605 aa	Predicted RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ADAMTS6	Q9UKP5	1117 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ERVK-11	Q9UQG0	969 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	KNL1	Q8NG31	2342 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	TRBV5-4	A0A0C4DH59	114 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	MEI4	A8MW99	385 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	MEN1	O00255	615 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	AZIN1	O14977	448 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	SLC31A1	O15431	190 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	LINC00032	P0C843	101 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	CSRP3	P50461	194 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	CTSC	P53634	463 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	B4GALNT1	Q00973	533 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	HTR4	Q13639	388 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	PGS1	Q32NB8	556 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ZNF776	Q68DI1	518 aa	Predicted RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	OR56A4	Q8NGH8	313 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	DTD2	Q96FN9	168 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	FOPNL	Q96NB1	174 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	TRMO	Q9BU70	441 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	TP63	Q9H3D4	680 aa	Predicted RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	GSTO2	Q9H4Y5	243 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	OPTC	Q9UBM4	332 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	BCAP29	Q9UHQ4	241 aa		11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	COLQ	Q9Y215	455 aa	Predicted RBP	11.4	□□□□□ -0.58
LMO7-204	ENST00000377499	ANXA5	P08758	320 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	MTHFD2	P13995	350 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	ATF4	P18848	351 aa	Predicted RBP	11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	EIF2D	P41214	584 aa	Known RBP	11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	PIK3CG	P48736	1102 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	PPP2R2B	Q00005	443 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	SPIDR	Q14159	915 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	RGS21	Q2M5E4	152 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	SNAP47	Q5SQN1	464 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	KIAA1211L	Q6NV74	962 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	EPGN	Q6UW88	154 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	TMEM151B	Q8IW70	566 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	CLYBL	Q8N0X4	340 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	METTL6	Q8TCB7	284 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	PYCR2	Q96C36	320 aa		11.4	□□□□□ -0.59
LMO7-204	ENST00000377499	GOLGA4	Q13439	2230 aa	Known RBP	11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	SH3BP2	P78314	561 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	LCP2	Q13094	533 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	GNA13	Q14344	377 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	HENMT1	Q5T8I9	393 aa	Known RBP	11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	KDM1B	Q8NB78	822 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	MCOLN3	Q8TDD5	553 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	SIPA1	Q96FS4	1042 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	MED30	Q96HR3	178 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	LRCH3	Q96II8	777 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	ATG10	Q9H0Y0	220 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	OSGEPL1	Q9H4B0	414 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	SAR1A	Q9NR31	198 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	NUDT4	Q9NZJ9	180 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	ZNHIT2	Q9UHR6	403 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499		A0A1B0GTW7	788 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	KRBA1	A5PL33	1030 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	KRT87P	A6NCN2	255 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	FFAR3	O14843	346 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	GPR42	O15529	346 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	GRID2	O43424	1007 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	SGTA	O43765	313 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	OR4F21	O95013	312 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	TSPAN12	O95859	305 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	DBT	P11182	482 aa	Known RBP	11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	CYP2A7	P20853	494 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	STX1B	P61266	288 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	TUBA3C	Q13748	450 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	NANOGP8	Q6NSW7	305 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	PELI3	Q8N2H9	469 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	LILRB2	Q8N423	598 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	RASGEF1A	Q8N9B8	481 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	SGCD	Q92629	289 aa		11.39	□□□□□ -0.59
LMO7-204	ENST00000377499	MED8	Q96G25	268 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms