RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MAP10Q9P2G4 905 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 TTC7AQ9ULT0 858 aaPredicted RBP20.21■□□□□ 0.83
VSX1-201ENST00000376707 MRFAP1Q9Y605 127 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 MED13Q9UHV7 2174 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 A0A1B0GX78 115 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 BLACEA4D250 179 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 CNOT3O75175 753 aaKnown RBP20.2■□□□□ 0.82
VSX1-201ENST00000376707 ALPPP05187 535 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 RPS3P23396 243 aaKnown RBP eCLIP20.2■□□□□ 0.82
VSX1-201ENST00000376707 GRIA3P42263 894 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 EIF3BP55884 814 aaKnown RBP20.2■□□□□ 0.82
VSX1-201ENST00000376707 CYP2A13Q16696 494 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 FHL5Q5TD97 284 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 FIGLAQ6QHK4 219 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 GALNT16Q8N428 558 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 Q8NA96 180 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 FOPNLQ96NB1 174 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 KIFC1Q9BW19 673 aa20.2■□□□□ 0.82
VSX1-201ENST00000376707 MRM3Q9HC36 420 aaKnown RBP20.2■□□□□ 0.82
VSX1-201ENST00000376707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.19■□□□□ 0.82
VSX1-201ENST00000376707 KLHL41O60662 606 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 AGFG2O95081 481 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 VAPBO95292 243 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 FKBP9O95302 570 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 UMODP07911 640 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 PIM1P11309 404 aaPredicted RBP20.19■□□□□ 0.82
VSX1-201ENST00000376707 MGAT1P26572 445 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 VARSP26640 1264 aaKnown RBP20.19■□□□□ 0.82
VSX1-201ENST00000376707 MAGEA6P43360 314 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 BDKRB1P46663 353 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 FOXL2P58012 376 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 MYBPC3Q14896 1274 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 PRR30Q53SZ7 412 aaPredicted RBP20.19■□□□□ 0.82
VSX1-201ENST00000376707 TCTE1Q5JU00 501 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 ARMC3Q5W041 872 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 FCRL6Q6DN72 434 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 MRNIPQ6NTE8 343 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 LRRC8BQ6P9F7 803 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 PPP1R32Q7Z5V6 425 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 SDCCAG8Q86SQ7 713 aaPredicted RBP20.19■□□□□ 0.82
VSX1-201ENST00000376707 RASGEF1CQ8N431 466 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 FKBP10Q96AY3 582 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 PSMG3-AS1Q96PY0 264 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 LRRC4CQ9HCJ2 640 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 SLC22A11Q9NSA0 550 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 JRKLQ9Y4A0 524 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 NFS1Q9Y697 457 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 PCSK5Q92824 1860 aa20.19■□□□□ 0.82
VSX1-201ENST00000376707 PFDN6O15212 129 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 C1orf105O95561 183 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 ARNTP27540 789 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 CCNFP41002 786 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 GCGRP47871 477 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 GRM7Q14831 915 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 CNSTQ6PJW8 725 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 CES3Q6UWW8 571 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 TTC29Q8NA56 475 aaPredicted RBP20.18■□□□□ 0.82
VSX1-201ENST00000376707 MFSD3Q96ES6 412 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 SELENOSQ9BQE4 189 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 SLC29A3Q9BZD2 475 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 CUTCQ9NTM9 273 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 SYBUQ9NX95 663 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 RUVBL2Q9Y230 463 aaKnown RBP20.18■□□□□ 0.82
VSX1-201ENST00000376707 SEC16AO15027 2179 aa20.18■□□□□ 0.82
VSX1-201ENST00000376707 TCRBV7S3A2A0A539 114 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 TARM1B6A8C7 271 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 DSCR3O14972 297 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 PRICKLE3O43900 615 aaPredicted RBP20.17■□□□□ 0.82
VSX1-201ENST00000376707 IPO13O94829 963 aaKnown RBP20.17■□□□□ 0.82
VSX1-201ENST00000376707 MCM3P25205 808 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 FMO4P31512 558 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 KCNJ11Q14654 390 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 CCSMST1Q4G0I0 132 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 CTSL3PQ5NE16 218 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 RNF187Q5TA31 235 aaPredicted RBP20.17■□□□□ 0.82
VSX1-201ENST00000376707 YOD1Q5VVQ6 348 aaPredicted RBP20.17■□□□□ 0.82
VSX1-201ENST00000376707 OVCH1Q7RTY7 1134 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 MAGEC3Q8TD91 643 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 ZUFSPQ96AP4 578 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 PBKQ96KB5 322 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 MIPEPQ99797 713 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 ATP13A2Q9NQ11 1180 aa20.17■□□□□ 0.82
VSX1-201ENST00000376707 TSR3Q9UJK0 312 aaKnown RBP20.17■□□□□ 0.82
VSX1-201ENST00000376707 GOLGA8KD6RF30 607 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 H3BMM5 538 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 GOLGA8TH3BQL2 631 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 AGPSO00116 658 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 ALBP02768 609 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 ITGAXP20702 1163 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 PSMB5P28074 263 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 TERF1P54274 439 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 TTC27Q6P3X3 843 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 TMEM151BQ8IW70 566 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 IQCKQ8N0W5 287 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 TM9SF4Q92544 642 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 NACC2Q96BF6 587 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 BIRC8Q96P09 236 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 ZNF552Q9H707 407 aaPredicted RBP20.16■□□□□ 0.82
VSX1-201ENST00000376707 WDR54Q9H977 334 aa20.16■□□□□ 0.82
VSX1-201ENST00000376707 CDC23Q9UJX2 597 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms