RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 VNN3Q9NY84 501 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 PLEKHA6Q9Y2H5 1048 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF726A6NNF4 738 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 UBXN7O94888 489 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 BCHEP06276 602 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 XKP51811 444 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 TPTEP56180 551 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SLBPQ14493 270 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 PRPF38BQ5VTL8 546 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 GALNT11Q8NCW6 608 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 GIN1Q9NXP7 522 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 REM1O75628 298 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 LILRA4P59901 499 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 CRB2Q5IJ48 1285 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 FKBP1CQ5VVH2 108 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SYVN1Q86TM6 617 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 TMEM192Q8IY95 271 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF101Q8IZC7 436 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 ADAD1Q96M93 576 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 BEX2Q9BXY8 128 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 CADM1Q9BY67 442 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 BEX1Q9HBH7 125 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 A0A1W2PRB8 838 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 E7EQ34 232 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 L7N2F9 121 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 PRAMEF12O95522 483 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 HSD3B2P26439 372 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 VAMP2P63027 116 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 NOGQ13253 232 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 TIGD6Q17RP2 521 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SNX29P2Q8IUI4 249 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 COL21A1Q96P44 957 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 RIOK2Q9BVS4 552 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 TBL1XR1Q9BZK7 514 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 APOBEC3GQ9HC16 384 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SMURF1Q9HCE7 757 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SLC33A1O00400 549 aaPredicted RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 JUNP05412 331 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 CXCR1P25024 350 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 GRIA1P42261 906 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 MAGEA2P43356 314 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 COL20A1Q9P218 1284 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 C13orf42A0A1B0GVH6 325 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TCRBV7S3A2A0A539 114 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 EI24O14681 340 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 AURKAO14965 403 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 COL6A2P12110 1019 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 CCNHP51946 323 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TAS2R39P59534 338 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TEAD4Q15561 434 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TAF1AQ15573 450 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 AMZ2Q86W34 360 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 SNX27Q96L92 541 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 UPB1Q9UBR1 384 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 YARS2Q9Y2Z4 477 aaKnown RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 GMEB1Q9Y692 573 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 VNN2O95498 520 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 BLMHQ13867 455 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 UAP1L1Q3KQV9 507 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TAMM41Q96BW9 452 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 C7orf26Q96N11 449 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 EBF2Q9HAK2 575 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 FBXW11Q9UKB1 542 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 FZD4Q9ULV1 537 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF99A8MXY4 864 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 J3QLW9 94 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 PLOD2O00469 737 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TLX3O43711 291 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF19P17023 458 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 DGKQP52824 942 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 NPAS4Q8IUM7 802 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 TM9SF2Q99805 663 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 MLXQ9UH92 298 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 SCELO95171 688 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 RORCP51449 518 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 ID2Q02363 134 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 RBM48Q5RL73 367 aaKnown RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 ARL9Q6T311 187 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 POLR2J3Q9H1A7 115 aaKnown RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 RHCGQ9UBD6 479 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 RASGEF1BQ0VAM2 473 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 CERS6Q6ZMG9 384 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 YIPF7Q8N8F6 280 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 OR10G2Q8NGC3 310 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 WDR77Q9BQA1 342 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 AIFM2Q9BRQ8 373 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 RBCK1Q9BYM8 510 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF350Q9GZX5 532 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 MAGEE1Q9HCI5 957 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 MKKSQ9NPJ1 570 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-201ENST00000375820 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
COL4A1-201ENST00000375820 MEN1O00255 615 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms