RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 C19orf43Q9BQ61 176 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CLSTN3Q9BQT9 956 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 ENPP5Q9UJA9 477 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 SNX6Q9UNH7 406 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 BACE2Q9Y5Z0 518 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 ZNF99A8MXY4 864 aaPredicted RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 RFXANKO14593 260 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 MITFO75030 526 aaPredicted RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 LRATO95237 230 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 ZNF682O95780 498 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CBSLP0DN79 551 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CBSP35520 551 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 GP2P55259 537 aaKnown RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 IL1RL1Q01638 556 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 EMX1Q04741 257 aaPredicted RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 LDLRAP1Q5SW96 308 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CPZQ66K79 652 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 SHQ1Q6PI26 577 aaKnown RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 CHPFQ8IZ52 775 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 FAM9CQ8IZT9 166 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CBARPQ8N350 705 aaPredicted RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 SLC43A3Q8NBI5 491 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CHPT1Q8WUD6 406 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 SLC22A12Q96S37 553 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 ABCG8Q9H221 673 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 GPRC5BQ9NZH0 403 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 ERGIC3Q9Y282 383 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 FUOMA2VDF0 154 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SOBPA7XYQ1 873 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 BOLA2-SMG1P6H3BVE0 249 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 UGT2B11O75310 529 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 CCNDBP1O95273 360 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 ANGPTL1O95841 491 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 IMPDH2P12268 514 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 IGFBP5P24593 272 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 PTPN6P29350 595 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 ARHGDIAP52565 204 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 GTF2H3Q13889 308 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SIM2Q14190 667 aaPredicted RBP14.17□□□□□ -0.14
MSH5-201ENST00000375703 UBE2R2Q712K3 238 aaPredicted RBP14.17□□□□□ -0.14
MSH5-201ENST00000375703 CYP4Z1Q86W10 505 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 PIK3C3Q8NEB9 887 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 EGLN2Q96KS0 407 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 ATP13A3Q9H7F0 1226 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 VNN3Q9NY84 501 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 PPT2Q9UMR5 302 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SAMD4AQ9UPU9 718 aaKnown RBP14.17□□□□□ -0.14
MSH5-201ENST00000375703 NAALAD2Q9Y3Q0 740 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 EVPLLA8MZ36 301 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SULT1C4O75897 302 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 ITGAMP11215 1152 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 CCR7P32248 378 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 GSTM4Q03013 218 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 OCA2Q04671 838 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 RGS21Q2M5E4 152 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SLC44A4Q53GD3 710 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 CARD16Q5EG05 197 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 TPGS1Q6ZTW0 290 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
MSH5-201ENST00000375703 SLC22A15Q8IZD6 547 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 TMCO5AQ8N6Q1 288 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SKA2Q8WVK7 121 aaPredicted RBP14.17□□□□□ -0.14
MSH5-201ENST00000375703 CMTM7Q96FZ5 175 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 FBXO10Q9UK96 956 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 B3GNT3Q9Y2A9 372 aa14.17□□□□□ -0.14
MSH5-201ENST00000375703 SOCS5O75159 536 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ABLIM3O94929 683 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 LATS1O95835 1130 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 FUCA1P04066 466 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 SDC1P18827 310 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 MAPK1P28482 360 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 OPRL1P41146 370 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 MAPK8P45983 427 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 VEPH1Q14D04 833 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 LAPTM4AQ15012 233 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 CTF1Q16619 201 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 TCTN1Q2MV58 587 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 CDKL4Q5MAI5 379 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 OR4F3Q6IEY1 312 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 TTC23LQ6PF05 361 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 PIWIL3Q7Z3Z3 882 aaKnown RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 DNAJB7Q7Z6W7 309 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 IGFN1Q86VF2 1251 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ARL14EPQ8N8R7 260 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 SETD9Q8NE22 299 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 MCOLN3Q8TDD5 553 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 FBLIM1Q8WUP2 373 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 FAR1Q8WVX9 515 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZNF566Q969W8 418 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 TESCQ96BS2 214 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ASIC4Q96FT7 647 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 TRMT2BQ96GJ1 504 aaKnown RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 APIPQ96GX9 242 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 SH3YL1Q96HL8 342 aaPredicted RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZNF347Q96SE7 839 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 BARD1Q99728 777 aaKnown RBP14.16□□□□□ -0.14
MSH5-201ENST00000375703 RIBC2Q9H4K1 309 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 AASDHPPTQ9NRN7 309 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 ZDHHC3Q9NYG2 299 aa14.16□□□□□ -0.14
MSH5-201ENST00000375703 DOLKQ9UPQ8 538 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms