RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 H7BY64 318 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 SERPINA1P01009 418 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 VARSP26640 1264 aaKnown RBP17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 C6orf89Q6UWU4 347 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 DNASE1L2Q92874 299 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 PRAP1Q96NZ9 151 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 CGREF1Q99674 301 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 KLF16Q9BXK1 252 aaPredicted RBP17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 PCBD2Q9H0N5 130 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 POLR1DQ9Y2S0 133 aa17.52■□□□□ 0.39
PTPDC1-202ENST00000375360 SOX6P35712 828 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 BLKP51451 505 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 UGT2B15P54855 530 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 ANKRD26P1Q6NSI1 321 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 PLEKHM3Q6ZWE6 761 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 MGME1Q9BQP7 344 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 LRRC3Q9BY71 257 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 ZBTB26Q9HCK0 441 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 WASH3PC4AMC7 463 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 CLIC1O00299 241 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 OPN1SWP03999 348 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 AOC1P19801 751 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 PAX7P23759 505 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 STXBP1P61764 594 aaKnown RBP17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 GRB7Q14451 532 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 PTPRRQ15256 657 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 UNC50Q53HI1 259 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 XKR4Q5GH76 650 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 ERICH5Q6P6B1 374 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 KDELC1Q6UW63 502 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 DDHD1Q8NEL9 900 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 PEX13Q92968 403 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 SCRN2Q96FV2 425 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 FZD3Q9NPG1 666 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 IL26Q9NPH9 171 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 KLHL1Q9NR64 748 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 TMEM30AQ9NV96 361 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 DZANK1Q9NVP4 752 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 DGKBQ9Y6T7 804 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 NUP205Q92621 2012 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 LATO43561 262 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 CTSKP43235 329 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 RPS13P62277 151 aaKnown RBP17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 ZNF542PQ5EBM4 170 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 IRAK1BP1Q5VVH5 260 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 CRTC1Q6UUV9 634 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 LRRC70Q7Z2Q7 622 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 A0A1W2PQU0 124 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 ARSAP15289 507 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 ACRV1P26436 265 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 AQP4P55087 323 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 FOXM1Q08050 763 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 SLC9A5Q14940 896 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 OR4D1Q15615 310 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 MAPK11Q15759 364 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 C6orf136Q5SQH8 315 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 PDE12Q6L8Q7 609 aaKnown RBP17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 COQ10BQ9H8M1 238 aa17.51■□□□□ 0.39
PTPDC1-202ENST00000375360 CFIP05156 583 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 PGRP06401 933 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 LAMP2P13473 410 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CEBPBP17676 345 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CDH12P55289 794 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 SMIM11AP58511 58 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 C16orf72Q14CZ0 275 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 TRIM16LQ309B1 348 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 LMAN2LQ9H0V9 348 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 PNPLA3Q9NST1 481 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 SDHDO14521 159 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 TRIM24O15164 1050 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 HLA-DQA2P01906 255 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 KLKB1P03952 638 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CBSLP0DN79 551 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CBSP35520 551 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 RANBP1P43487 201 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 SPINT3P49223 89 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 RGS8P57771 180 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 MGAT3Q09327 533 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 SLC13A2Q13183 592 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 MACC1Q6ZN28 852 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 ISCA2Q86U28 154 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 ZDHHC21Q8IVQ6 265 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 CENPNQ96H22 339 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 SUCOQ9UBS9 1254 aaKnown RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 ATP6V1HQ9UI12 483 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 NPIPB15A6NHN6 443 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 PDLIM1O00151 329 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 LIN7AO14910 233 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 NDUFS4O43181 175 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 GPIP06744 558 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 TSPAN19P0C672 248 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 DEFA1P59665 94 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 DEFA3P59666 94 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 C1orf61Q13536 156 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 KLHL12Q53G59 568 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 USP39Q53GS9 565 aaKnown RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 GPR107Q5VW38 600 aa17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 NAIF1Q69YI7 327 aaPredicted RBP17.5■□□□□ 0.39
PTPDC1-202ENST00000375360 ARL10Q8N8L6 244 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms