RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 U3KQV3 271 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 IGLV3-22A0A075B6J6 115 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM62Q0P6H9 643 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 RAB41Q5JT25 222 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CERCAMQ5T4B2 595 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 RHBDF2Q6PJF5 856 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 LRRC69Q6ZNQ3 347 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 TRAPPC5Q8IUR0 188 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 NXPE2Q96DL1 559 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 ZSWIM3Q96MP5 696 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 KCNH6Q9H252 994 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MEPEQ9NQ76 525 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 PMF1-BGLAPU3KQ54 211 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 H3BM21 787 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 KMOO15229 486 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 BANF1O75531 89 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 NDUFS1P28331 727 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CSTF1Q05048 431 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SLC35F1Q5T1Q4 408 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 METAP1DQ6UB28 335 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 DENND1CQ8IV53 801 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 FBXO16Q8IX29 292 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SIMC1Q8NDZ2 872 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 TNFRSF10DQ9UBN6 386 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 NR2E3Q9Y5X4 410 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 A0A0J9YVX5 310 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 FFAR2O15552 330 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 TMEM63AO94886 807 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 RYKP34925 604 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 INCA1Q0VD86 236 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 HSDL2Q6YN16 418 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 DCP2Q8IU60 420 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MMAAQ8IVH4 418 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 PNLDC1Q8NA58 520 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SLC7A13Q8TCU3 470 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF668Q96K58 619 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 FAM129BQ96TA1 746 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 FBXO9Q9UK97 447 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 E9PAM4 449 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 IFNA21P01568 189 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 GBE1Q04446 702 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 PAOXQ6QHF9 649 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CATSPERGQ6ZRH7 1159 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 BTN2A1Q7KYR7 527 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF227Q86WZ6 799 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 OR5B17Q8NGF7 314 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SLC32A1Q9H598 525 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SNTG1Q9NSN8 517 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 NPEPPSL1A6NEC2 478 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MCIDASD6RGH6 385 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 AURKAO14965 403 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 H1F0P07305 194 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 ECM1Q16610 540 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 NKAPLQ5M9Q1 402 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MS4A15Q8N5U1 240 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 TCEAL3Q969E4 200 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 LGALS12Q96DT0 336 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CCDC115Q96NT0 180 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 HSPB11Q9Y547 144 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 DAPL1A0PJW8 107 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 OR2B3O76000 313 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 MT-ND5P03915 603 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CDH13P55290 713 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SLC25A11Q02978 314 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CBX2Q14781 532 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 SLC9B1Q4ZJI4 515 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 IDNKQ5T6J7 187 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 GPR65Q8IYL9 337 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 BCO2Q9BYV7 579 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 LYARQ9NX58 379 aaKnown RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 A0A096LPI6 279 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 ASPAP45381 313 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 CDH12P55289 794 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 TDGQ13569 410 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 GRB14Q14449 540 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 OR13J1Q8NGT2 312 aa9.97□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF717Q9BY31 904 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 PAK1IP1Q9NWT1 392 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-204ENST00000375290 WRBO00258 174 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 UBXN7O94888 489 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 TRAPPC2P0DI81 140 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 TRAPPC2BP0DI82 140 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 MPIP34949 423 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 C2orf80Q0P641 193 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 SELPLGQ14242 412 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 PKP2Q99959 881 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 IFT46Q9NQC8 304 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 HCN2Q9UL51 889 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 CTSHP09668 335 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 BDNFP23560 247 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 ENTPD1P49961 510 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 PPP2R2BQ00005 443 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 ZNF783Q6ZMS7 281 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 STOML3Q8TAV4 291 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 TCRBV7S2A1N4TA0A589 114 aa9.96□□□□□ -0.81
PTCH1-204ENST00000375290 RNASEH2AO75792 299 aaKnown RBP9.96□□□□□ -0.81
PTCH1-204ENST00000375290 SLC25A14O95258 325 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-204ENST00000375290 GMPRP36959 345 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms