RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 PCDHA13Q9Y5I0 950 aa16.65■□□□□ 0.26
H2AFX-201ENST00000375167 ZNHIT1O43257 154 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 RARAP10276 462 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 COX6A1P12074 109 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 HOXC12P31275 282 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 CD86P42081 329 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 SSR1P43307 286 aaKnown RBP16.64■□□□□ 0.26
H2AFX-201ENST00000375167 AP2B1P63010 937 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 ZNF33BQ06732 778 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 LONRF2Q1L5Z9 754 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 ZZZ3Q8IYH5 903 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 TXLNBQ8N3L3 684 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 MAML1Q92585 1016 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 HSPH1Q92598 858 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 RBM41Q96IZ5 413 aaKnown RBP16.64■□□□□ 0.26
H2AFX-201ENST00000375167 CSPG4P5Q96PW8 444 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 FERD3LQ96RJ6 166 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 TRIM51Q9BSJ1 452 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 TFB2MQ9H5Q4 396 aaKnown RBP16.64■□□□□ 0.26
H2AFX-201ENST00000375167 RASSF1Q9NS23 344 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.64■□□□□ 0.263e-9■■■■■ 30.8
H2AFX-201ENST00000375167 TEKT2Q9UIF3 430 aa16.64■□□□□ 0.26
H2AFX-201ENST00000375167 VSTM2BA6NLU5 285 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 DSCR3O14972 297 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 KLK8O60259 260 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 HLA-DQB2P05538 268 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 POLBP06746 335 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 HSF1Q00613 529 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 MESDQ14696 234 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 ATG9BQ674R7 924 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 TXNRD3NBQ6F5E7 133 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 POLNQ7Z5Q5 900 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 CDC20BQ86Y33 519 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 ADGRF3Q8IZF5 1079 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 DDHD1Q8NEL9 900 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 OR52E1Q8NGJ3 308 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 OR2L2Q8NH16 312 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.64■□□□□ 0.25
H2AFX-201ENST00000375167 RND1Q92730 232 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 HDAC10Q969S8 669 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 CCM2Q9BSQ5 444 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 RIC8BQ9NVN3 520 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 C3orf18Q9UK00 162 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 L3MBTL1Q9Y468 752 aa16.64■□□□□ 0.25
H2AFX-201ENST00000375167 INAFM1C9JVW0 142 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 MATN3O15232 486 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 UGT2B7P16662 529 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 EEF1DP29692 281 aaKnown RBP16.63■□□□□ 0.25
H2AFX-201ENST00000375167 AKT1P31749 480 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 GCGRP47871 477 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 KLC1Q07866 573 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 KEAP1Q14145 624 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 RAD9BQ6WBX8 426 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 SIAH3Q8IW03 269 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 PHC2Q8IXK0 858 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 MARVELD2Q8N4S9 558 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 CPSF7Q8N684 471 aaKnown RBP16.63■□□□□ 0.25
H2AFX-201ENST00000375167 PWWP2AQ96N64 755 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 FRMD6Q96NE9 622 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 NRTNQ99748 197 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 NEUROD4Q9HD90 331 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 BPIFA1Q9NP55 256 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 MKL2Q9ULH7 1088 aa16.63■□□□□ 0.25
H2AFX-201ENST00000375167 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
H2AFX-201ENST00000375167 A0A0J9YY10 115 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 ASPDHA6ND91 283 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 CXCR2P25025 360 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 HADHBP55084 474 aaKnown RBP16.62■□□□□ 0.25
H2AFX-201ENST00000375167 OCA2Q04671 838 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 ATP13A4Q4VNC1 1196 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 DET1Q7L5Y6 550 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 CPNE8Q86YQ8 564 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 TMEM139Q8IV31 216 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 CHERPQ8IWX8 916 aaKnown RBP16.62■□□□□ 0.25
H2AFX-201ENST00000375167 PRSS58Q8IYP2 241 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 DNAJC22Q8N4W6 341 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 FAM98AQ8NCA5 519 aaKnown RBP16.62■□□□□ 0.25
H2AFX-201ENST00000375167 SIMC1Q8NDZ2 872 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 FAM71BQ8TC56 605 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 COX4I2Q96KJ9 171 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 XKR8Q9H6D3 395 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 KLHL1Q9NR64 748 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 CUTCQ9NTM9 273 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 EURLQ9NYK6 297 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 IL1RAPL1Q9NZN1 696 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 ASB1Q9Y576 335 aa16.62■□□□□ 0.25
H2AFX-201ENST00000375167 HRNRQ86YZ3 2850 aaPredicted RBP16.61■□□□□ 0.25
H2AFX-201ENST00000375167 SNRNP200O75643 2136 aaKnown RBP16.61■□□□□ 0.25
H2AFX-201ENST00000375167 CELA2AP08217 269 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 MMP2P08253 660 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 ITGAMP11215 1152 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 TAS2R40P59535 323 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 EEF1A2Q05639 463 aaKnown RBP16.61■□□□□ 0.25
H2AFX-201ENST00000375167 KRT81Q14533 505 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 PPP2R5EQ16537 467 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 GPRC6AQ5T6X5 926 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
H2AFX-201ENST00000375167 CD163Q86VB7 1156 aa16.61■□□□□ 0.25
H2AFX-201ENST00000375167 METTL27Q8N6F8 245 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms