RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 HEATR4Q86WZ0 1026 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TDHQ8IZJ6 230 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LIX1Q8N485 282 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OXR1Q8N573 874 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OR2T3Q8NH03 318 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FOXJ1Q92949 421 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZUFSPQ96AP4 578 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GABRG3Q99928 467 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PCDHAC1Q9H158 963 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MUC13Q9H3R2 512 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PEX1O43933 1283 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PRPS2P11908 318 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ACADLP28330 430 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LTBRP36941 435 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CASP2P42575 452 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 EEFSECP57772 596 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CDK3Q00526 305 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 WSCD2Q2TBF2 565 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GRHL2Q6ISB3 625 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 UNC5DQ6UXZ4 953 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HDDC3Q8N4P3 179 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 WDR20Q8TBZ3 569 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ERLEC1Q96DZ1 483 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FCRL1Q96LA6 429 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OR4K3Q96R72 315 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CLDND1Q9NY35 253 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SERGEFQ9UGK8 458 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DNMT3AQ9Y6K1 912 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GPR89AB7ZAQ6 455 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 H0YIV9 168 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CLGNO14967 610 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 STAMBPO95630 424 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PCCBP05166 539 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RPSAP08865 295 aaKnown RBP17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GPR89BP0CG08 455 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 BCKDHAP12694 445 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CD22P20273 847 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MAPK1P28482 360 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 NTSR1P30989 418 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TIE1P35590 1138 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PTGR1Q14914 329 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 COL19A1Q14993 1142 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC44A4Q53GD3 710 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OGFRL1Q5TC84 451 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CRTC3Q6UUV7 619 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SUSD1Q6UWL2 747 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DHFR2Q86XF0 187 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KIAA2013Q8IYS2 634 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GOLM1Q8NBJ4 401 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ECSITQ9BQ95 431 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TEX101Q9BY14 249 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DPY30Q9C005 99 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CLMPQ9H6B4 373 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ITM2CQ9NQX7 267 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RIMS3Q9UJD0 308 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LRCH1Q9Y2L9 728 aa17.47■□□□□ 0.39
HLA-DQB1-201ENST00000374943 A0A1W2PP55 124 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KLHL33A6NCF5 533 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 E7EQ34 232 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PCDH8O95206 1070 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IL6P05231 212 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HSD3B1P14060 373 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HSD3B2P26439 372 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PNLIPRP1P54315 467 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SEC13P55735 322 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DOC2AQ14183 400 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ADGRE1Q14246 886 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 XKR6Q5GH73 641 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LCN8Q6JVE9 175 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC2A7Q6PXP3 512 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IZUMO2Q6UXV1 221 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DLEU7Q6UYE1 221 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PTRH1Q86Y79 214 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HID1Q8IV36 788 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OR9A1PQ8NGU1 263 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZNF480Q8WV37 535 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MTFMTQ96DP5 389 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MED8Q96G25 268 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 METTL2AQ96IZ6 378 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SGPP1Q9BX95 441 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TRIM15Q9C019 465 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KLHL4Q9C0H6 718 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OR52A5Q9H2C5 316 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 BRWD1Q9NSI6 2320 aa17.46■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DNAJA2O60884 412 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CAPNS1P04632 268 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CTHP32929 405 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NEK2P51955 445 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CLNS1AP54105 237 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CLDN8P56748 225 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PWP1Q13610 501 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NFE2L1Q14494 772 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 FXNQ16595 210 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CAPN13Q6MZZ7 669 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TRMT11Q7Z4G4 463 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PDZD3Q86UT5 571 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LRRTM4Q86VH4 590 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CACUL1Q86Y37 369 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SMRP1Q8NCR6 262 aa17.45■□□□□ 0.38
HLA-DQB1-201ENST00000374943 OR2T34Q8NGX1 318 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms