RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 DMC1Q14565 340 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 FAM109BQ6ICB4 259 aaPredicted RBP15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 TSPAN14Q8NG11 270 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 BTN2A2Q8WVV5 523 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 NCLNQ969V3 563 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 TMIGD2Q96BF3 282 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 C9orf16Q9BUW7 83 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 MRPS26Q9BYN8 205 aaKnown RBP15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 MAGEL2Q9UJ55 1249 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 INVSQ9Y283 1065 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 DYTNA2CJ06 578 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 NPPAP01160 153 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 IL6P05231 212 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ANXA6P08133 673 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 CISD3P0C7P0 127 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 MYCLP1P12525 358 aaPredicted RBP15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 GGT1P19440 569 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 MMP12P39900 470 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 MERTKQ12866 999 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 PPIGQ13427 754 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■■□□□ 13.5
CNKSR1-202ENST00000374253 FRG2Q64ET8 278 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 OR4F3Q6IEY1 312 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC30A9Q6PML9 568 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 TECPR1Q7Z6L1 1165 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 PROSER1Q86XN7 944 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF786Q8N393 782 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 TRAM1L1Q8N609 369 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 DDHD1Q8NEL9 900 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 VN1R2Q8NFZ6 395 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 GLYATL1Q969I3 302 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 TMEM159Q96B96 161 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 FRG2BQ96QU4 278 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ADGRE2Q9UHX3 823 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC8A2Q9UPR5 921 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 H0YJX3 145 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC16A8O95907 504 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 FESP07332 822 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 MPC1LP0DKB6 136 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC14A1Q13336 389 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 INTS11Q5TA45 600 aaKnown RBP15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ANKRD34AQ69YU3 496 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 KIAA0907Q7Z7F0 614 aaPredicted RBP15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 THOC6Q86W42 341 aaKnown RBP15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 TBC1D21Q8IYX1 336 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 HS3ST5Q8IZT8 346 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF548Q8NEK5 533 aaPredicted RBP15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ZSCAN5AQ9BUG6 496 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 ANKRD60Q9BZ19 345 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 MUC13Q9H3R2 512 aa15.53■□□□□ 0.08
CNKSR1-202ENST00000374253 H6PDO95479 791 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 FGF19O95750 216 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 FTH1P02794 183 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 TCF3P15923 654 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 S100A3P33764 101 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 HNMTP50135 292 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 ST8SIA6P61647 398 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 APOFQ13790 326 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 PLCL1Q15111 1095 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 OR7A2PQ8NGA2 310 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 OR8J3Q8NGG0 315 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 SMG7Q92540 1137 aaKnown RBP15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 ARMC5Q96C12 935 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 RMND5BQ96G75 393 aaPredicted RBP15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 OR4K3Q96R72 315 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 TRIM4Q9C037 500 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 NTN4Q9HB63 628 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 SERHLQ9NQF3 203 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 KLHL42Q9P2K6 505 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 PRKAB1Q9Y478 270 aa15.52■□□□□ 0.08
CNKSR1-202ENST00000374253 VILLO15195 856 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 GMNNO75496 209 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 RASAL1O95294 804 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 DOC2AQ14183 400 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 SPATS1Q496A3 300 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 FNDC3BQ53EP0 1204 aaKnown RBP15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 TMTC4Q5T4D3 741 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 IRAK1BP1Q5VVH5 260 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 AGTRAPQ6RW13 159 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 DPPA4Q7L190 304 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 GALNT10Q86SR1 603 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 TRIML2Q8N7C3 387 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 ZFP28Q8NHY6 868 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 FAM162AQ96A26 154 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 PAIP1Q9H074 479 aaKnown RBP15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 OR2AG1Q9H205 316 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 LTB4R2Q9NPC1 389 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 MYRFQ9Y2G1 1151 aa15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 GOLGA4Q13439 2230 aaKnown RBP15.52■□□□□ 0.07
CNKSR1-202ENST00000374253 ATG2BQ96BY7 2078 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 CLOCKO15516 846 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 SPINT1O43278 529 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 SLCO2B1O94956 709 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 CDH1P12830 882 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 FXNQ16595 210 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 RUNDC3AQ59EK9 446 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 NOXRED1Q6NXP6 359 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 ERAP2Q6P179 960 aa15.51■□□□□ 0.07
CNKSR1-202ENST00000374253 SPRED1Q7Z699 444 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms