RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KIAA0040Q15053 153 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 IMPG1Q17R60 797 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 FRG2Q64ET8 278 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 ZFAND4Q86XD8 727 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 LRRC56Q8IYG6 542 aaPredicted RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 MTFMTQ96DP5 389 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 FRG2BQ96QU4 278 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 GPATCH1Q9BRR8 931 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 SGPP1Q9BX95 441 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 ITM2CQ9NQX7 267 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 SLC2A4RGQ9NR83 387 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 C1orf109Q9NX04 203 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 GPRC5BQ9NZH0 403 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 CROTQ9UKG9 612 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 PACSIN3Q9UKS6 424 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 MMP17Q9ULZ9 603 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 SLC17A4Q9Y2C5 497 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 POLR3HQ9Y535 204 aaPredicted RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 ASPDHA6ND91 283 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 E7ENX8 843 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 ANGPT2O15123 496 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 RSL1D1O76021 490 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 CEACAM5P06731 702 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 ACADMP11310 421 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 GNAZP19086 355 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 JAK1P23458 1154 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 MAT2AP31153 395 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 NEK2P51955 445 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 POLR2JP52435 117 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 KCNK10P57789 538 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 TAP2Q03519 686 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 DOC2AQ14183 400 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 RCN1Q15293 331 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 XKR6Q5GH73 641 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 WDR20Q8TBZ3 569 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 SPAG4Q9NPE6 437 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 CD93Q9NPY3 652 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 TMEM181Q9P2C4 612 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 STX18Q9P2W9 335 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 EIF3LQ9Y262 564 aaKnown RBP15.23■□□□□ 0.03
HDAC8-209ENST00000373589 ASF1AQ9Y294 204 aa15.23■□□□□ 0.03
HDAC8-209ENST00000373589 H0YIV9 168 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 FXYD1O00168 92 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 SOX1O00570 391 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 SEC22BO75396 215 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 EEDO75530 441 aaKnown RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 SRFP11831 508 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 NPPBP16860 134 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 ME2P23368 584 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 HNF4AP41235 474 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 TBPL1P62380 186 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 PRKG2Q13237 762 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 TLR1Q15399 786 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 SMAD2Q15796 467 aaKnown RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 GRHL2Q6ISB3 625 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 CAPN13Q6MZZ7 669 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 LAYNQ6UX15 382 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 KIAA1324Q6UXG2 1013 aaKnown RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 FAM124AQ86V42 546 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 SYTL1Q8IYJ3 562 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 OR5AR1Q8NGP9 310 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 JADE3Q92613 823 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 TFGQ92734 400 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 HOPXQ9BPY8 73 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 APOOQ9BUR5 198 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 FZD3Q9NPG1 666 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-209ENST00000373589 KCNE2Q9Y6J6 123 aa15.22■□□□□ 0.03
HDAC8-209ENST00000373589 DYTNA2CJ06 578 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 PRR19A6NJB7 356 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 TRIM38O00635 465 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 CLGNO14967 610 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 SLC31A1O15431 190 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 FKBP6O75344 327 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 HOXC4P09017 264 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-209ENST00000373589 XRCC1P18887 633 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-209ENST00000373589 CD72P21854 359 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 PNLIPRP1P54315 467 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 AAGABQ6PD74 315 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 SLCO4C1Q6ZQN7 724 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 TRIM69Q86WT6 500 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 GALNT13Q8IUC8 556 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 DCUN1D3Q8IWE4 304 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 MINDY1Q8N5J2 469 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 PHC3Q8NDX5 983 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 VPS33AQ96AX1 596 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 RAD51AP1Q96B01 352 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 CMTM7Q96FZ5 175 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 SCARF2Q96GP6 870 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-209ENST00000373589 LRCH3Q96II8 777 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 TIMM29Q9BSF4 260 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 ADA2Q9NZK5 511 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 CD300AQ9UGN4 299 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 ACSL5Q9ULC5 683 aa15.21■□□□□ 0.03
HDAC8-209ENST00000373589 MYO10Q9HD67 2058 aa15.21■□□□□ 0.02
HDAC8-209ENST00000373589 TCRBV21S2A2A0A5A6 115 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms