RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 MMP3P08254 477 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 RBM39Q14498 530 aaKnown RBP8.92□□□□□ -0.98
CSMD2-205ENST00000373381 ZNF776Q68DI1 518 aaPredicted RBP8.92□□□□□ -0.98
CSMD2-205ENST00000373381 TMEM220Q6QAJ8 160 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 FBXW5Q969U6 566 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 ZDHHC12Q96GR4 267 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 GAL3ST1Q99999 423 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 C2CD2Q9Y426 696 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PCDHGA10Q9Y5H3 936 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 IQCF5A8MTL0 148 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 RCBTB2O95199 551 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 FASLGP48023 281 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 MAXP61244 160 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 RHBDF2Q6PJF5 856 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 FAM183BPQ6ZVS7 135 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 CFAP52Q8N1V2 620 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 OR8H1Q8NGG4 311 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PPTC7Q8NI37 304 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 MAPKAP1Q9BPZ7 522 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 KATNBL1Q9H079 304 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 SDHAF2Q9NX18 166 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 RAB21Q9UL25 225 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 HIF3AQ9Y2N7 669 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 BTBD17A6NE02 478 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PI15O43692 258 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 DLX3O60479 287 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 RRAS2P62070 204 aaPredicted RBP8.92□□□□□ -0.98
CSMD2-205ENST00000373381 TIGD5Q53EQ6 642 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 ZCCHC23Q6ZST2 131 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 ZNF554Q86TJ5 538 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 OR8S1Q8NH09 359 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 LMX1AQ8TE12 382 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 TM9SF3Q9HD45 589 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 FAM105AQ9NUU6 356 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PFKLP17858 780 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 POLR2JP52435 117 aaKnown RBP8.92□□□□□ -0.98
CSMD2-205ENST00000373381 FAAP100Q0VG06 881 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 DPY19L3Q6ZPD9 716 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 ANKRD23Q86SG2 305 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 BOLLQ8N9W6 283 aaKnown RBP8.92□□□□□ -0.98
CSMD2-205ENST00000373381 GLYATL1Q969I3 302 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 CITED4Q96RK1 184 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 VWA7Q9Y334 891 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PAGE1O75459 146 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 IGKV5-2P06315 115 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 GLI1P08151 1106 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 EDNRAP25101 427 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 IRAK1P51617 712 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PDK4Q16654 411 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PITRM1Q5JRX3 1037 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PNPT1Q8TCS8 783 aaKnown RBP8.92□□□□□ -0.98
CSMD2-205ENST00000373381 ALG2Q9H553 416 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 NMUR1Q9HB89 426 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 TREM1Q9NP99 234 aa8.92□□□□□ -0.98
CSMD2-205ENST00000373381 PRAMEF1O95521 474 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 FHP07954 510 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 TAF10Q12962 218 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 RAB12Q6IQ22 244 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 NPAS4Q8IUM7 802 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 C19orf12Q9NSK7 152 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 GRHL1Q9NZI5 618 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 SPATA31A1Q5TZJ5 1347 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 GJB1P08034 283 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 COX4I1P13073 169 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 PRKCHP24723 683 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 FMR1Q06787 632 aaKnown RBP eCLIP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 RCAN2Q14206 197 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 PCDH20Q8N6Y1 951 aaKnown RBP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 PCDHB18PQ96TA0 734 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 WNT9AO14904 365 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 UBOX5O94941 541 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 IFNA7P01567 189 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 ITGB1P05556 798 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 SSTR1P30872 391 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 EIF1AXP47813 144 aaKnown RBP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 C6orf141Q5SZD1 244 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 NET1Q7Z628 596 aaPredicted RBP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 IL17RCQ8NAC3 791 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 NAA11Q9BSU3 229 aaPredicted RBP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 NDST3O95803 873 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 CHRFAM7AQ494W8 412 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 DCP2Q8IU60 420 aaKnown RBP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 TRAPPC12Q8WVT3 735 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 C7orf50Q9BRJ6 194 aaKnown RBP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 NGBQ9NPG2 151 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 DGKBQ9Y6T7 804 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 GPM6BQ13491 265 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 GPR139Q6DWJ6 353 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 GALNT5Q7Z7M9 940 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 OR56B2PQ8NGI1 322 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 NCSTNQ92542 709 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 GSKIPQ9P0R6 139 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 MGAT4CQ9UBM8 478 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 RAP2CQ9Y3L5 183 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 HDAC3O15379 428 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 RORCP51449 518 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 ARL16Q0P5N6 197 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.98
CSMD2-205ENST00000373381 AHSA2Q719I0 299 aa8.91□□□□□ -0.98
CSMD2-205ENST00000373381 TMEM100Q9NV29 134 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms