RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 PXDC1Q5TGL8 231 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 METTL2BQ6P1Q9 378 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 NOXA1Q86UR1 476 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 ALDH16A1Q8IZ83 802 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 TOMM5Q8N4H5 51 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 METTL2AQ96IZ6 378 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 ZSWIM3Q96MP5 696 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 TBL1YQ9BQ87 522 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 XYLT2Q9H1B5 865 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 NUDT15Q9NV35 164 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 A0A0A0MRY4 1105 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CIB4A0PJX0 185 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 MBLAC1A4D2B0 266 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 ZNF701M0R085 212 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 TRAFD1O14545 582 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 PER2O15055 1255 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 SLC2A4P14672 509 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 RABGGTBP53611 331 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 GRK1Q15835 563 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 PTCHD4Q6ZW05 846 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 TFAP2DQ7Z6R9 452 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 GRAMD2AQ8IUY3 354 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CARNMT1Q8N4J0 409 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 PHF10Q8WUB8 498 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 COQ10AQ96MF6 247 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 SPATA13Q96N96 652 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 DPY30Q9C005 99 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.45□□□□□ -1.384e-6■■■□□ 16
CHD6-203ENST00000373233 OR12D3Q9UGF7 316 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 HIF3AQ9Y2N7 669 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 AAR2Q9Y312 384 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 RFPL1O75677 317 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 ZSCAN5DPP0CG00 497 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 GNAZP19086 355 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 PRKAR1BP31321 381 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 SMARCB1Q12824 385 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 KRT33BQ14525 404 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 TSPAN33Q86UF1 283 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 SPPL2CQ8IUH8 684 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CNTD1Q8N815 330 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 OR5T3Q8NGG3 340 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 C12orf57Q99622 126 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 TM9SF2Q99805 663 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 MECRQ9BV79 373 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 UPB1Q9UBR1 384 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 MEMO1Q9Y316 297 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 PCDHA11Q9Y5I1 949 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 A8MUA0 341 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 ZNF705GA8MUZ8 300 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 HSPA12AO43301 675 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 AQP9O43315 295 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CPSF4O95639 269 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 CSF2P04141 144 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CCL5P13501 91 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CRHR1P34998 444 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 RAB4BP61018 213 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 VAMP2P63027 116 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 NKX6-1P78426 367 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 PRAMEF17Q5VTA0 474 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 QRSL1Q9H0R6 528 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 IL1RAPQ9NPH3 570 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 EGFL7Q9UHF1 273 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 INVSQ9Y283 1065 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 KIF26BQ2KJY2 2108 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 OR6C65A6NJZ3 312 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 POLR1CO15160 346 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 LDOC1O95751 146 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 HIST1H2AGP0C0S8 130 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 ITGA2P17301 1181 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 HIST1H2ADP20671 130 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 PPP2R1BP30154 601 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 EIF2DP41214 584 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 PTGIRP43119 386 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 GRIA4P48058 902 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 SPIBQ01892 262 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 RGS1Q08116 209 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 SMUG1Q53HV7 270 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 LINGO2Q7L985 606 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 BANPQ8N9N5 519 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CLEC4CQ8WTT0 213 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 AUTS2Q8WXX7 1259 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 MRPS31Q92665 395 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 FBXL20Q96IG2 436 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 HIST1H2AHQ96KK5 128 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 PRICKLE1Q96MT3 831 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 HIST1H2AJQ99878 128 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 H2AFJQ9BTM1 129 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHD6-203ENST00000373233 COMMD3Q9UBI1 195 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 ERI2A8K979 691 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 A8MX80 341 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 ARVCFO00192 962 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 MSI1O43347 362 aaKnown RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 RPN2P04844 631 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 FOXN2P32314 431 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 TM4SF4P48230 202 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 ARHGDIBP52566 201 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 DSG2Q14126 1118 aa6.45□□□□□ -1.38
CHD6-203ENST00000373233 CRTC2Q53ET0 693 aaPredicted RBP6.45□□□□□ -1.38
CHD6-203ENST00000373233 LIPMQ5VYY2 423 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms