RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SLC6A2P23975 617 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 CTHP32929 405 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 NEK2P51955 445 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 NFE2L1Q14494 772 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 AAK1Q2M2I8 961 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 SPATS1Q496A3 300 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 KIAA1211LQ6NV74 962 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 SPATA24Q86W54 205 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 SLC15A3Q8IY34 581 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 LIX1Q8N485 282 aa24.27■■□□□ 1.48
CTSA-203ENST00000372459 TRPM6Q9BX84 2022 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 NME4O00746 187 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 CLGNO14967 610 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 VARSP26640 1264 aaKnown RBP24.26■■□□□ 1.47
CTSA-203ENST00000372459 CASP2P42575 452 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 GLB1L3Q8NCI6 653 aaPredicted RBP24.26■■□□□ 1.47
CTSA-203ENST00000372459 GANCQ8TET4 914 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 GATA6Q92908 595 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 CMTM7Q96FZ5 175 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 ECSITQ9BQ95 431 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 DPY30Q9C005 99 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 FBRSQ9HAH7 460 aa24.26■■□□□ 1.47
CTSA-203ENST00000372459 E7EQ34 232 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 NPIPB8E9PQR5 432 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 PCDH1Q08174 1060 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 PTGR1Q14914 329 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 KIAA0040Q15053 153 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 TMEM196Q5HYL7 178 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 IZUMO2Q6UXV1 221 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 LRRTM4Q86VH4 590 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 AMZ2Q86W34 360 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 DPP10Q8N608 796 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 OR4K3Q96R72 315 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 CMTM6Q9NX76 183 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 FBXL12Q9NXK8 326 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 DLGAP2Q9P1A6 1054 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 PCDHA9Q9Y5H5 950 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 TEAD1P28347 426 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 HNF4AP41235 474 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 RPA4Q13156 261 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 USP39Q53GS9 565 aaKnown RBP24.25■■□□□ 1.47
CTSA-203ENST00000372459 OR9A1PQ8NGU1 263 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 LGR4Q9BXB1 951 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 TEX101Q9BY14 249 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 MKRN2Q9H000 416 aaKnown RBP24.25■■□□□ 1.47
CTSA-203ENST00000372459 GPRC5BQ9NZH0 403 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 C6orf203Q9P0P8 240 aaPredicted RBP24.25■■□□□ 1.47
CTSA-203ENST00000372459 ZFR2Q9UPR6 939 aaKnown RBP24.25■■□□□ 1.47
CTSA-203ENST00000372459 TMED5Q9Y3A6 229 aa24.25■■□□□ 1.47
CTSA-203ENST00000372459 DNTTP04053 509 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 HSD17B1P14061 328 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 PCSK2P16519 638 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 ACADLP28330 430 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 RPS21P63220 83 aaKnown RBP24.24■■□□□ 1.47
CTSA-203ENST00000372459 DOC2AQ14183 400 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 C6orf10Q5SRN2 563 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 GRHL2Q6ISB3 625 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 CAPN13Q6MZZ7 669 aaPredicted RBP24.24■■□□□ 1.47
CTSA-203ENST00000372459 SLC2A7Q6PXP3 512 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 UNC5DQ6UXZ4 953 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 PRR23BQ6ZRT6 265 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 SYTL1Q8IYJ3 562 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 ZNF480Q8WV37 535 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 VCX3BQ9H321 246 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 MBNL1Q9NR56 388 aaKnown RBP24.24■■□□□ 1.47
CTSA-203ENST00000372459 PRKAB1Q9Y478 270 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 PCYT1BQ9Y5K3 369 aaPredicted RBP24.24■■□□□ 1.47
CTSA-203ENST00000372459 KCNE2Q9Y6J6 123 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 DNMT3AQ9Y6K1 912 aaPredicted RBP24.24■■□□□ 1.47
CTSA-203ENST00000372459 SZT2Q5T011 3432 aa24.24■■□□□ 1.47
CTSA-203ENST00000372459 C15orf38-AP3S2A0A0A6YYH1 394 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 BCKDHAP12694 445 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 CD22P20273 847 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 MAPK1P28482 360 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 INPP5AQ14642 412 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 SUSD1Q6UWL2 747 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 FAM83HQ6ZRV2 1179 aaPredicted RBP24.23■■□□□ 1.47
CTSA-203ENST00000372459 ARPINQ7Z6K5 226 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 FAM9CQ8IZT9 166 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 PQLC1Q8N2U9 271 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 IL17RCQ8NAC3 791 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 DNAJB14Q8TBM8 379 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 TMEM125Q96AQ2 219 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 OR52A5Q9H2C5 316 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 WDR26Q9H7D7 661 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 ITM2CQ9NQX7 267 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 MTCH2Q9Y6C9 303 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 XIRP2A4UGR9 3374 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 PAK4O96013 591 aaPredicted RBP24.23■■□□□ 1.47
CTSA-203ENST00000372459 EGFP01133 1207 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 C8BP07358 591 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 PRPS2P11908 318 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 BNIP2Q12982 314 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 CSTF3Q12996 717 aaKnown RBP24.23■■□□□ 1.47
CTSA-203ENST00000372459 PON2Q15165 354 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 IRF4Q15306 451 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 OR52E8Q6IFG1 317 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 DHFR2Q86XF0 187 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 WDR20Q8TBZ3 569 aa24.23■■□□□ 1.47
CTSA-203ENST00000372459 ZDHHC5Q9C0B5 715 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms