RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FBXO48Q5FWF7 155 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 C6orf10Q5SRN2 563 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 LCN8Q6JVE9 175 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 Q6ZSR9 355 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 ZFAND4Q86XD8 727 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 DPP10Q8N608 796 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 OR2T34Q8NGX1 318 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 OR2T3Q8NH03 318 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
LDB3-204ENST00000372066 DCUN1D1Q96GG9 259 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 DEC1Q9P2X7 70 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 GIMAP2Q9UG22 337 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 FBXO10Q9UK96 956 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 NME4O00746 187 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 LSM1O15116 133 aaKnown RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 BNIP3LO60238 219 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ADAM23O75077 832 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 STK16O75716 305 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 FTH1P02794 183 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 PROS1P07225 676 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 CEACAM1P13688 526 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ATP1B2P14415 290 aaPredicted RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 CSRP1P21291 193 aaKnown RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 JAK1P23458 1154 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 SLC6A2P23975 617 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 MAPK9P45984 424 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 HNMTP50135 292 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 RALGDSQ12967 914 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 NFYCQ13952 458 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 INPP5AQ14642 412 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 NR6A1Q15406 480 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 PHKG1Q16816 387 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 GGTA1PQ4G0N0 100 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 LAYNQ6UX15 382 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 NUDT18Q6ZVK8 323 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 SYT12Q8IV01 421 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 SLC15A3Q8IY34 581 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 FAM9CQ8IZT9 166 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 TRAM1L1Q8N609 369 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 TMEM102Q8N9M5 508 aaPredicted RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 FRS2Q8WU20 508 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ESAMQ96AP7 390 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 MIEF2Q96C03 454 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ACOX2Q99424 681 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 COPS7BQ9H9Q2 264 aaPredicted RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 ARMC1Q9NVT9 282 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ACTR3BQ9P1U1 418 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 SLCO3A1Q9UIG8 710 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
LDB3-204ENST00000372066 PCDHA9Q9Y5H5 950 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 ABCA7Q8IZY2 2146 aa13.72□□□□□ -0.21
LDB3-204ENST00000372066 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 DENRO43583 198 aaKnown RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 TULP3O75386 442 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 GUCA1CO95843 209 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 LYNP07948 512 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 SPINK2P20155 84 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 CYP2A7P20853 494 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 ZFP36L2P47974 494 aaKnown RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 AP1S2P56377 157 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 NME5P56597 212 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 B4GALNT1Q00973 533 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 LRRC36Q1X8D7 754 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 DPPA4Q7L190 304 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 TRIM46Q7Z4K8 759 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 PTRH1Q86Y79 214 aaKnown RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 SFRP1Q8N474 314 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 ZNF513Q8N8E2 541 aaPredicted RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 CHST14Q8NCH0 376 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 GLB1L3Q8NCI6 653 aaPredicted RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 FAM156AQ8NDB6 213 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 DDHD1Q8NEL9 900 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 UCMAQ8WVF2 138 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 ZBTB18Q99592 522 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 PKP2Q99959 881 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 ZSCAN5AQ9BUG6 496 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 SLC12A9Q9BXP2 914 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 FAM83DQ9H4H8 585 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 PARVBQ9HBI1 364 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 TMEM74BQ9NUR3 256 aa13.71□□□□□ -0.21
LDB3-204ENST00000372066 EIF3LQ9Y262 564 aaKnown RBP13.71□□□□□ -0.21
LDB3-204ENST00000372066 A8MX80 341 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 C1QTNF9BB2RNN3 333 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 PSMD11O00231 422 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 KRT6AP02538 564 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 KRT6BP04259 564 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 HIST1H2AGP0C0S8 130 aaPredicted RBP13.71□□□□□ -0.22
LDB3-204ENST00000372066 C1QTNF9P0C862 333 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 HIST1H2ADP20671 130 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 XPAP23025 273 aaPredicted RBP13.71□□□□□ -0.22
LDB3-204ENST00000372066 AKT1P31749 480 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 CCR7P32248 378 aa13.71□□□□□ -0.22
LDB3-204ENST00000372066 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms