RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PDLIM5Q96HC4 596 aaKnown RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 IL17FQ96PD4 163 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 PANX1Q96RD7 426 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 C1QTNF3Q9BXJ4 246 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 HSFX1Q9UBD0 423 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SLC8A2Q9UPR5 921 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ZNF510Q9Y2H8 683 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 hCG_2039718K7EN88 272 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SLC28A1O00337 649 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 LATS1O95835 1130 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SERPINA1P01009 418 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ALBP02768 609 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ENO2P09104 434 aaPredicted RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 EBLN1P0CF75 366 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ATXN8OSP0DMR3 200 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 RPS3P23396 243 aaKnown RBP eCLIP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 RFC2P35250 354 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 PSMD8P48556 350 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 RPL26P61254 145 aaKnown RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SLC14A1Q13336 389 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 GRM2Q14416 872 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 NKG7Q16617 165 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 CYP27C1Q4G0S4 372 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 CLVS1Q8IUQ0 354 aaPredicted RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 MMAAQ8IVH4 418 aaKnown RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SGCDQ92629 289 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ZUFSPQ96AP4 578 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 C9orf16Q9BUW7 83 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 CFHR5Q9BXR6 569 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 CCDC90BQ9GZT6 254 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 HEBP1Q9NRV9 189 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 MOSPD1Q9UJG1 213 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SPTBN5Q9NRC6 3674 aaKnown RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 TRBV5-4A0A0C4DH59 114 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ARHGEF33A8MVX0 844 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 PTGES3LE9PB15 166 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 TMX2-CTNND1H3BSU7 103 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 AREL1O15033 823 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ANKRD28O15084 1053 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 LATO43561 262 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 HS6ST1O60243 411 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 COX7A2P14406 83 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 HNF4AP41235 474 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 CCT8P50990 548 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 C16orf72Q14CZ0 275 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 DHCR24Q15392 516 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 HKDC1Q2TB90 917 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 FAM98BQ52LJ0 330 aaKnown RBP11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ELMSAN1Q6PJG2 1045 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 NETO1Q8TDF5 533 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ASZ1Q8WWH4 475 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ASB11Q8WXH4 323 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SNX19Q92543 992 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 TPD52L3Q96J77 140 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 MUS81Q96NY9 551 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 RETREG1Q9H6L5 497 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 DNAJC11Q9NVH1 559 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 ARMC1Q9NVT9 282 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 SNX6Q9UNH7 406 aa11.43□□□□□ -0.58
PDE6C-201ENST00000371447 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 VILLO15195 856 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 BMP2P12643 396 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 SDC1P18827 310 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 CYP4F2P78329 520 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 TMEM115Q12893 351 aaPredicted RBP11.42□□□□□ -0.58
PDE6C-201ENST00000371447 MPP7Q5T2T1 576 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 PPP4R4Q6NUP7 873 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 NECAB2Q7Z6G3 386 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 AHI1Q8N157 1196 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 SMG7Q92540 1137 aaKnown RBP11.42□□□□□ -0.58
PDE6C-201ENST00000371447 VOPP1Q96AW1 172 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 HIC2Q96JB3 615 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 SGK2Q9HBY8 427 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 PPT2Q9UMR5 302 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 CCL27Q9Y4X3 112 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 NUMA1Q14980 2115 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 ELOVL7A1L3X0 281 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 PRRT4C9JH25 899 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 CXCR6O00574 342 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 TULP3O75386 442 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 PABPC4LP0CB38 370 aaKnown RBP11.42□□□□□ -0.58
PDE6C-201ENST00000371447 IL7RP16871 459 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 EEFSECP57772 596 aaKnown RBP11.42□□□□□ -0.58
PDE6C-201ENST00000371447 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.42□□□□□ -0.58
PDE6C-201ENST00000371447 CATSPEREQ5SY80 951 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 FRG2Q64ET8 278 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 LPCAT2Q7L5N7 544 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 GPR180Q86V85 440 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 GALNT15Q8N3T1 639 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 TFAP2CQ92754 450 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 MAL2Q969L2 176 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 SDCCAG3Q96C92 435 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 FRG2BQ96QU4 278 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 BDH2Q9BUT1 245 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
PDE6C-201ENST00000371447 REXO4Q9GZR2 422 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms