RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SLC6A20Q9NP91 592 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 TXLNGQ9NUQ3 528 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 CTSFQ9UBX1 484 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 SRPK3Q9UPE1 567 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 RP1L1Q8IWN7 2480 aaPredicted RBP12.62□□□□□ -0.39
RPF1-201ENST00000370654 MDC1Q14676 2089 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 SPTBN1Q01082 2364 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 LOC105369274A0A096LPK9 316 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 LOC102723532A0A0G2JNH3 316 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 A0A1W2PPV9 198 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 GOLGA8KD6RF30 607 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 GOLGA8TH3BQL2 631 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 PEX12O00623 359 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 PRMT5O14744 637 aaPredicted RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 CD3EAPO15446 510 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 CBX6O95503 412 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 C1orf105O95561 183 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 COL8A1P27658 744 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 KCNJ1P48048 391 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 FASTKQ14296 549 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 SF1Q15637 639 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 NKG7Q16617 165 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 PCID2Q5JVF3 399 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 IGFL3Q6UXB1 125 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 UNC5DQ6UXZ4 953 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 OVCH1Q7RTY7 1134 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 CUZD1Q86UP6 607 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 LURAP1LQ8IV03 231 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 OR4N4Q8N0Y3 316 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 RNF10Q8N5U6 811 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 PPHLN1Q8NEY8 458 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 ASZ1Q8WWH4 475 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 DOCK10Q96BY6 2186 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 FAM136AQ96C01 138 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 MFSD3Q96ES6 412 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 FER1L6-AS2Q96M78 137 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 ZNF285Q96NJ3 590 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 BIRC8Q96P09 236 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 TRIM56Q9BRZ2 755 aaKnown RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 SOX17Q9H6I2 414 aaPredicted RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 CUTCQ9NTM9 273 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 C5AR2Q9P296 337 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 ERRFI1Q9UJM3 462 aaPredicted RBP12.61□□□□□ -0.39
RPF1-201ENST00000370654 FBXL4Q9UKA2 621 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 B3GNT3Q9Y2A9 372 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 HS3ST3B1Q9Y662 390 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 MAU2Q9Y6X3 613 aa12.61□□□□□ -0.39
RPF1-201ENST00000370654 NUP210LQ5VU65 1888 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 A0A1B0GX78 115 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 AGPSO00116 658 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 ONECUT2O95948 504 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 S1PR4O95977 384 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 GAS8O95995 478 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 APOA4P06727 396 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 MGAT1P26572 445 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 TERF1P54274 439 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 VSX2P58304 361 aaPredicted RBP12.6□□□□□ -0.39
RPF1-201ENST00000370654 Q0VFX4 171 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 HIF1AQ16665 826 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 PTRHD1Q6GMV3 140 aaKnown RBP12.6□□□□□ -0.39
RPF1-201ENST00000370654 KIRREL2Q6UWL6 708 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 CCDC89Q8N998 374 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 CLEC1AQ8NC01 280 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 TTC1Q99614 292 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 MIPEPQ99797 713 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 C17orf62Q9BQA9 187 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 FRMD8P1Q9BZ68 369 aaPredicted RBP12.6□□□□□ -0.39
RPF1-201ENST00000370654 SYBUQ9NX95 663 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 PAK5Q9P286 719 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 TTC7AQ9ULT0 858 aaPredicted RBP12.6□□□□□ -0.39
RPF1-201ENST00000370654 PCM1Q15154 2024 aa12.6□□□□□ -0.39
RPF1-201ENST00000370654 DSCR3O14972 297 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 NIPSNAP2O75323 286 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 CLDN1O95832 211 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 MMP11P24347 488 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 CDC25BP30305 580 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 FMO4P31512 558 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
RPF1-201ENST00000370654 SOX8P57073 446 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 SNRPNP63162 240 aaKnown RBP12.59□□□□□ -0.39
RPF1-201ENST00000370654 BASP1P80723 227 aaKnown RBP12.59□□□□□ -0.39
RPF1-201ENST00000370654 CYP2A13Q16696 494 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.59□□□□□ -0.39
RPF1-201ENST00000370654 WASHC2DQ5SRD0 308 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 CNSTQ6PJW8 725 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 Q6ZS92 163 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 NLRP9Q7RTR0 991 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 HPS6Q86YV9 775 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 PARP9Q8IXQ6 854 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 SHISA5Q8N114 240 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 MPP5Q8N3R9 675 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 IP6K3Q96PC2 410 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 SELENOSQ9BQE4 189 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 IL1RAPL1Q9NZN1 696 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms