RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 DCAKDQ8WVC6 231 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 TCTN2Q96GX1 697 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 ZNF578Q96N58 590 aaPredicted RBP13.3□□□□□ -0.28
SSR4-202ENST00000370085 TAAR9Q96RI9 348 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 EGFL8Q99944 293 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 MENTQ9BUN1 341 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 PITPNM3Q9BZ71 974 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 CCDC86Q9H6F5 360 aaKnown RBP13.3□□□□□ -0.28
SSR4-202ENST00000370085 CCDC177Q9NQR7 707 aaPredicted RBP13.3□□□□□ -0.28
SSR4-202ENST00000370085 FBXO8Q9NRD0 319 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 SLC39A1Q9NY26 324 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 ADAMTS6Q9UKP5 1117 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 RAB21Q9UL25 225 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 OARD1Q9Y530 152 aa13.3□□□□□ -0.28
SSR4-202ENST00000370085 A0A096LPK6 155 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 NPEPPSL1A6NEC2 478 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 SYCE1LA8MT33 242 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 TRIM49D1C9J1S8 452 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 POLR1CO15160 346 aaPredicted RBP13.29□□□□□ -0.28
SSR4-202ENST00000370085 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
SSR4-202ENST00000370085 SLC35E2BP0CK96 405 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 TPBGLP0DKB5 382 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 HSD17B3P37058 310 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 PGGT1BP53609 377 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 PPP1CAP62136 330 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 CDKL1Q00532 357 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 MC2RQ01718 297 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 FOXM1Q08050 763 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 CSHL1Q14406 222 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 IL11RAQ14626 422 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 CCSMST1Q4G0I0 132 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 UBAP2Q5T6F2 1119 aaKnown RBP13.29□□□□□ -0.28
SSR4-202ENST00000370085 TMEM207Q6UWW9 146 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 GPSM1Q86YR5 675 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 RASGRP3Q8IV61 690 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 TCAIMQ8N3R3 496 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 C2orf73Q8N5S3 287 aaPredicted RBP13.29□□□□□ -0.28
SSR4-202ENST00000370085 LMNTD1Q8N9Z9 388 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 OR8K5Q8NH50 307 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 STAG3L4Q8TBR4 150 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 DENND1AQ8TEH3 1009 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 ZNF480Q8WV37 535 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 ANKRD49Q8WVL7 239 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 SLC41A2Q96JW4 573 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 UBXN10Q96LJ8 280 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 SLC46A1Q96NT5 459 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 DHRS4Q9BTZ2 278 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 VPS11Q9H270 941 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 CNOT10Q9H9A5 744 aaKnown RBP13.29□□□□□ -0.28
SSR4-202ENST00000370085 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 RNF112Q9ULX5 631 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 BTRCQ9Y297 605 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 CHD8Q9HCK8 2581 aa13.29□□□□□ -0.28
SSR4-202ENST00000370085 SLC9B1P1A6NJY1 282 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 AGRPO00253 132 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CDC7O00311 574 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 BRINP1O60477 761 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CDH16O75309 829 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 GUCA1CO95843 209 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 ALDOAP04075 364 aaKnown RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 C2P06681 752 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 COL6A2P12110 1019 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 HGFP14210 728 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CD1DP15813 335 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 HRH2P25021 359 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CD82P27701 267 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 IMPA1P29218 277 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 ABATP80404 500 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 TUBB3Q13509 450 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 TSNQ15631 228 aaKnown RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 PHKG1Q16816 387 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 TSNAXIP1Q2TAA8 658 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CDKL4Q5MAI5 379 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CAPN13Q6MZZ7 669 aaPredicted RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 AGTRAPQ6RW13 159 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 SBSNQ6UWP8 590 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 UNQ6494/PRO21346Q6UXR6 183 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 LCA5Q86VQ0 697 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 D2HGDHQ8N465 521 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 C19orf47Q8N9M1 422 aaKnown RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 GATA6Q92908 595 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 ISL2Q96A47 359 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 KIAA1191Q96A73 305 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 ZUFSPQ96AP4 578 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 MED8Q96G25 268 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 TRAPPC9Q96Q05 1148 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 OR6C1Q96RD1 312 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 HAUS8Q9BT25 410 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 DDA1Q9BW61 102 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 CHRNA10Q9GZZ6 450 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 MRPS30Q9NP92 439 aaKnown RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 STOX2Q9P2F5 926 aaPredicted RBP13.28□□□□□ -0.28
SSR4-202ENST00000370085 DKK4Q9UBT3 224 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 RARRES3Q9UL19 164 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 PCDHGA7Q9Y5G6 932 aa13.28□□□□□ -0.28
SSR4-202ENST00000370085 AKAP13Q12802 2813 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms